Gene : Carub.0003s0390 C. rubella v1.1
Defline:  (1 of 1) PTHR31734//PTHR31734:SF28 - FAMILY NOT NAMED // AUXIN-RESPONSIVE PROTEIN IAA16 Genomic Order:  390
Name:  ? Carub.0003s0390 Secondary Identifier:  ? PAC:39240661
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0390 0.5kb upstream 0.5kb upstream 2605 true scaffold_3: 1289840-1292444 Capsella rubella
Carub.0003s0390 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1291945-1292444 Capsella rubella
Carub.0003s0390 0.5kb downstream 0.5kb downstream 2605 true scaffold_3: 1289340-1291944 Capsella rubella
Carub.0003s0390 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1289340-1289839 Capsella rubella
Carub.0003s0390 1.0kb upstream 1.0kb upstream 3105 true scaffold_3: 1289840-1292944 Capsella rubella
Carub.0003s0390 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1291945-1292944 Capsella rubella
Carub.0003s0390 1.0kb downstream 1.0kb downstream 3105 true scaffold_3: 1288840-1291944 Capsella rubella
Carub.0003s0390 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1288840-1289839 Capsella rubella
Carub.0003s0390 2.0kb upstream 2.0kb upstream 4105 true scaffold_3: 1289840-1293944 Capsella rubella
Carub.0003s0390 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1291945-1293944 Capsella rubella
Carub.0003s0390 2.0kb downstream 2.0kb downstream 4105 true scaffold_3: 1287840-1291944 Capsella rubella
Carub.0003s0390 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1287840-1289839 Capsella rubella
Carub.0003s0390 5.0kb upstream 5.0kb upstream 7105 true scaffold_3: 1289840-1296944 Capsella rubella
Carub.0003s0390 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1291945-1296944 Capsella rubella
Carub.0003s0390 5.0kb downstream 5.0kb downstream 7105 true scaffold_3: 1284840-1291944 Capsella rubella
Carub.0003s0390 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1284840-1289839 Capsella rubella
Carub.0003s0390 10.0kb upstream 10.0kb upstream 12105 true scaffold_3: 1289840-1301944 Capsella rubella
Carub.0003s0390 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1291945-1301944 Capsella rubella
Carub.0003s0390 10.0kb downstream 10.0kb downstream 12105 true scaffold_3: 1279840-1291944 Capsella rubella
Carub.0003s0390 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1279840-1289839 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376618 5261 Brassicaceae View MSA
123827922 5264 Brassicales-Malvales View MSA
124339044 5266 SBM View MSA
124239552 5268 Malvidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain