Gene : Carub.0003s0410 C. rubella v1.1
Defline:  (1 of 4) PTHR22814:SF134 - COPPER-BINDING FAMILY PROTEIN-RELATED Genomic Order:  410
Name:  ? Carub.0003s0410 Secondary Identifier:  ? PAC:39239964
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0410 0.5kb upstream 0.5kb upstream 1109 true scaffold_3: 1368181-1369289 Capsella rubella
Carub.0003s0410 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1368790-1369289 Capsella rubella
Carub.0003s0410 0.5kb downstream 0.5kb downstream 1109 true scaffold_3: 1367681-1368789 Capsella rubella
Carub.0003s0410 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1367681-1368180 Capsella rubella
Carub.0003s0410 1.0kb upstream 1.0kb upstream 1609 true scaffold_3: 1368181-1369789 Capsella rubella
Carub.0003s0410 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1368790-1369789 Capsella rubella
Carub.0003s0410 1.0kb downstream 1.0kb downstream 1609 true scaffold_3: 1367181-1368789 Capsella rubella
Carub.0003s0410 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1367181-1368180 Capsella rubella
Carub.0003s0410 2.0kb upstream 2.0kb upstream 2609 true scaffold_3: 1368181-1370789 Capsella rubella
Carub.0003s0410 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1368790-1370789 Capsella rubella
Carub.0003s0410 2.0kb downstream 2.0kb downstream 2609 true scaffold_3: 1366181-1368789 Capsella rubella
Carub.0003s0410 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1366181-1368180 Capsella rubella
Carub.0003s0410 5.0kb upstream 5.0kb upstream 5609 true scaffold_3: 1368181-1373789 Capsella rubella
Carub.0003s0410 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1368790-1373789 Capsella rubella
Carub.0003s0410 5.0kb downstream 5.0kb downstream 5609 true scaffold_3: 1363181-1368789 Capsella rubella
Carub.0003s0410 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1363181-1368180 Capsella rubella
Carub.0003s0410 10.0kb upstream 10.0kb upstream 10609 true scaffold_3: 1368181-1378789 Capsella rubella
Carub.0003s0410 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1368790-1378789 Capsella rubella
Carub.0003s0410 10.0kb downstream 10.0kb downstream 10609 true scaffold_3: 1358181-1368789 Capsella rubella
Carub.0003s0410 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1358181-1368180 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366405 5261 Brassicaceae View MSA
123835375 5264 Brassicales-Malvales View MSA
124322039 5266 SBM View MSA
124249975 5268 Malvidae View MSA
124070484 5270 Rosid View MSA
123750327 5271 Pentapetalae View MSA
122795966 5272 Eudicot View MSA
122049430 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain