Gene : Carub.0003s0414 C. rubella v1.1
Defline:  (1 of 2) PTHR31662//PTHR31662:SF6 - FAMILY NOT NAMED // DNA-BINDING STOREKEEPER PROTEIN-RELATED TRANSCRIPTIONAL REGULATOR Genomic Order:  414
Name:  ? Carub.0003s0414 Secondary Identifier:  ? PAC:39239432
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0414 0.5kb upstream 0.5kb upstream 1862 true scaffold_3: 1381344-1383205 Capsella rubella
Carub.0003s0414 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1381344-1381843 Capsella rubella
Carub.0003s0414 0.5kb downstream 0.5kb downstream 1862 true scaffold_3: 1381844-1383705 Capsella rubella
Carub.0003s0414 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1383206-1383705 Capsella rubella
Carub.0003s0414 1.0kb upstream 1.0kb upstream 2362 true scaffold_3: 1380844-1383205 Capsella rubella
Carub.0003s0414 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1380844-1381843 Capsella rubella
Carub.0003s0414 1.0kb downstream 1.0kb downstream 2362 true scaffold_3: 1381844-1384205 Capsella rubella
Carub.0003s0414 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1383206-1384205 Capsella rubella
Carub.0003s0414 2.0kb upstream 2.0kb upstream 3362 true scaffold_3: 1379844-1383205 Capsella rubella
Carub.0003s0414 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1379844-1381843 Capsella rubella
Carub.0003s0414 2.0kb downstream 2.0kb downstream 3362 true scaffold_3: 1381844-1385205 Capsella rubella
Carub.0003s0414 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1383206-1385205 Capsella rubella
Carub.0003s0414 5.0kb upstream 5.0kb upstream 6362 true scaffold_3: 1376844-1383205 Capsella rubella
Carub.0003s0414 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1376844-1381843 Capsella rubella
Carub.0003s0414 5.0kb downstream 5.0kb downstream 6362 true scaffold_3: 1381844-1388205 Capsella rubella
Carub.0003s0414 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1383206-1388205 Capsella rubella
Carub.0003s0414 10.0kb upstream 10.0kb upstream 11362 true scaffold_3: 1371844-1383205 Capsella rubella
Carub.0003s0414 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1371844-1381843 Capsella rubella
Carub.0003s0414 10.0kb downstream 10.0kb downstream 11362 true scaffold_3: 1381844-1393205 Capsella rubella
Carub.0003s0414 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1383206-1393205 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367443 5261 Brassicaceae View MSA
123832169 5264 Brassicales-Malvales View MSA
124336605 5266 SBM View MSA
124243934 5268 Malvidae View MSA
124072235 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain