Gene : Carub.0003s0084 C. rubella v1.1
Defline:  (1 of 2) 2.7.4.24 - Diphosphoinositol-pentakisphosphate kinase / PP-IP(5) kinase Genomic Order:  84
Name:  ? Carub.0003s0084 Secondary Identifier:  ? PAC:39239591
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6369 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0084 0.5kb upstream 0.5kb upstream 8788 true scaffold_3: 265210-273997 Capsella rubella
Carub.0003s0084 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 265210-265709 Capsella rubella
Carub.0003s0084 0.5kb downstream 0.5kb downstream 8788 true scaffold_3: 265710-274497 Capsella rubella
Carub.0003s0084 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 273998-274497 Capsella rubella
Carub.0003s0084 1.0kb upstream 1.0kb upstream 9288 true scaffold_3: 264710-273997 Capsella rubella
Carub.0003s0084 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 264710-265709 Capsella rubella
Carub.0003s0084 1.0kb downstream 1.0kb downstream 9288 true scaffold_3: 265710-274997 Capsella rubella
Carub.0003s0084 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 273998-274997 Capsella rubella
Carub.0003s0084 2.0kb upstream 2.0kb upstream 10288 true scaffold_3: 263710-273997 Capsella rubella
Carub.0003s0084 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 263710-265709 Capsella rubella
Carub.0003s0084 2.0kb downstream 2.0kb downstream 10288 true scaffold_3: 265710-275997 Capsella rubella
Carub.0003s0084 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 273998-275997 Capsella rubella
Carub.0003s0084 5.0kb upstream 5.0kb upstream 13288 true scaffold_3: 260710-273997 Capsella rubella
Carub.0003s0084 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 260710-265709 Capsella rubella
Carub.0003s0084 5.0kb downstream 5.0kb downstream 13288 true scaffold_3: 265710-278997 Capsella rubella
Carub.0003s0084 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 273998-278997 Capsella rubella
Carub.0003s0084 10.0kb upstream 10.0kb upstream 18288 true scaffold_3: 255710-273997 Capsella rubella
Carub.0003s0084 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 255710-265709 Capsella rubella
Carub.0003s0084 10.0kb downstream 10.0kb downstream 18288 true scaffold_3: 265710-283997 Capsella rubella
Carub.0003s0084 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 273998-283997 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367578 5261 Brassicaceae View MSA
123837097 5264 Brassicales-Malvales View MSA
124340776 5266 SBM View MSA
124254661 5268 Malvidae View MSA
124068507 5270 Rosid View MSA
123745531 5271 Pentapetalae View MSA
122790290 5272 Eudicot View MSA
122041984 5273 Angiosperm View MSA
121345196 5274 Embryophyte View MSA
123427581 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain