Gene : Carub.0003s0258 C. rubella v1.1
Defline:  (1 of 1) PTHR23315//PTHR23315:SF65 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  258
Name:  ? Carub.0003s0258 Secondary Identifier:  ? PAC:39242677
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0258 0.5kb upstream 0.5kb upstream 3431 true scaffold_3: 829661-833091 Capsella rubella
Carub.0003s0258 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 829661-830160 Capsella rubella
Carub.0003s0258 0.5kb downstream 0.5kb downstream 3431 true scaffold_3: 830161-833591 Capsella rubella
Carub.0003s0258 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 833092-833591 Capsella rubella
Carub.0003s0258 1.0kb upstream 1.0kb upstream 3931 true scaffold_3: 829161-833091 Capsella rubella
Carub.0003s0258 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 829161-830160 Capsella rubella
Carub.0003s0258 1.0kb downstream 1.0kb downstream 3931 true scaffold_3: 830161-834091 Capsella rubella
Carub.0003s0258 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 833092-834091 Capsella rubella
Carub.0003s0258 2.0kb upstream 2.0kb upstream 4931 true scaffold_3: 828161-833091 Capsella rubella
Carub.0003s0258 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 828161-830160 Capsella rubella
Carub.0003s0258 2.0kb downstream 2.0kb downstream 4931 true scaffold_3: 830161-835091 Capsella rubella
Carub.0003s0258 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 833092-835091 Capsella rubella
Carub.0003s0258 5.0kb upstream 5.0kb upstream 7931 true scaffold_3: 825161-833091 Capsella rubella
Carub.0003s0258 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 825161-830160 Capsella rubella
Carub.0003s0258 5.0kb downstream 5.0kb downstream 7931 true scaffold_3: 830161-838091 Capsella rubella
Carub.0003s0258 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 833092-838091 Capsella rubella
Carub.0003s0258 10.0kb upstream 10.0kb upstream 12931 true scaffold_3: 820161-833091 Capsella rubella
Carub.0003s0258 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 820161-830160 Capsella rubella
Carub.0003s0258 10.0kb downstream 10.0kb downstream 12931 true scaffold_3: 830161-843091 Capsella rubella
Carub.0003s0258 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 833092-843091 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381591 5261 Brassicaceae View MSA
123841075 5264 Brassicales-Malvales View MSA
124339513 5266 SBM View MSA
124250559 5268 Malvidae View MSA
124062792 5270 Rosid View MSA
123747212 5271 Pentapetalae View MSA
122790234 5272 Eudicot View MSA
122044762 5273 Angiosperm View MSA
121310337 5274 Embryophyte View MSA
123347849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain