Gene : Carub.0003s0267 C. rubella v1.1
Defline:  (1 of 3) 3.1.4.3 - Phospholipase C / Lipophosphodiesterase I Genomic Order:  267
Name:  ? Carub.0003s0267 Secondary Identifier:  ? PAC:39242208
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LIPASYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0267 0.5kb upstream 0.5kb upstream 2485 true scaffold_3: 860163-862647 Capsella rubella
Carub.0003s0267 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 862148-862647 Capsella rubella
Carub.0003s0267 0.5kb downstream 0.5kb downstream 2485 true scaffold_3: 859663-862147 Capsella rubella
Carub.0003s0267 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 859663-860162 Capsella rubella
Carub.0003s0267 1.0kb upstream 1.0kb upstream 2985 true scaffold_3: 860163-863147 Capsella rubella
Carub.0003s0267 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 862148-863147 Capsella rubella
Carub.0003s0267 1.0kb downstream 1.0kb downstream 2985 true scaffold_3: 859163-862147 Capsella rubella
Carub.0003s0267 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 859163-860162 Capsella rubella
Carub.0003s0267 2.0kb upstream 2.0kb upstream 3985 true scaffold_3: 860163-864147 Capsella rubella
Carub.0003s0267 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 862148-864147 Capsella rubella
Carub.0003s0267 2.0kb downstream 2.0kb downstream 3985 true scaffold_3: 858163-862147 Capsella rubella
Carub.0003s0267 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 858163-860162 Capsella rubella
Carub.0003s0267 5.0kb upstream 5.0kb upstream 6985 true scaffold_3: 860163-867147 Capsella rubella
Carub.0003s0267 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 862148-867147 Capsella rubella
Carub.0003s0267 5.0kb downstream 5.0kb downstream 6985 true scaffold_3: 855163-862147 Capsella rubella
Carub.0003s0267 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 855163-860162 Capsella rubella
Carub.0003s0267 10.0kb upstream 10.0kb upstream 11985 true scaffold_3: 860163-872147 Capsella rubella
Carub.0003s0267 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 862148-872147 Capsella rubella
Carub.0003s0267 10.0kb downstream 10.0kb downstream 11985 true scaffold_3: 850163-862147 Capsella rubella
Carub.0003s0267 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 850163-860162 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365377 5261 Brassicaceae View MSA
123831528 5264 Brassicales-Malvales View MSA
124345260 5266 SBM View MSA
124244843 5268 Malvidae View MSA
124067828 5270 Rosid View MSA
123747461 5271 Pentapetalae View MSA
122786129 5272 Eudicot View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain