Gene : Carub.0003s0278 C. rubella v1.1
Defline:  (1 of 2) PTHR11206//PTHR11206:SF154 - MULTIDRUG RESISTANCE PROTEIN // MATE EFFLUX FAMILY PROTEIN Genomic Order:  278
Name:  ? Carub.0003s0278 Secondary Identifier:  ? PAC:39240163
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0278 0.5kb upstream 0.5kb upstream 3336 true scaffold_3: 899059-902394 Capsella rubella
Carub.0003s0278 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 901895-902394 Capsella rubella
Carub.0003s0278 0.5kb downstream 0.5kb downstream 3336 true scaffold_3: 898559-901894 Capsella rubella
Carub.0003s0278 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 898559-899058 Capsella rubella
Carub.0003s0278 1.0kb upstream 1.0kb upstream 3836 true scaffold_3: 899059-902894 Capsella rubella
Carub.0003s0278 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 901895-902894 Capsella rubella
Carub.0003s0278 1.0kb downstream 1.0kb downstream 3836 true scaffold_3: 898059-901894 Capsella rubella
Carub.0003s0278 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 898059-899058 Capsella rubella
Carub.0003s0278 2.0kb upstream 2.0kb upstream 4836 true scaffold_3: 899059-903894 Capsella rubella
Carub.0003s0278 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 901895-903894 Capsella rubella
Carub.0003s0278 2.0kb downstream 2.0kb downstream 4836 true scaffold_3: 897059-901894 Capsella rubella
Carub.0003s0278 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 897059-899058 Capsella rubella
Carub.0003s0278 5.0kb upstream 5.0kb upstream 7836 true scaffold_3: 899059-906894 Capsella rubella
Carub.0003s0278 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 901895-906894 Capsella rubella
Carub.0003s0278 5.0kb downstream 5.0kb downstream 7836 true scaffold_3: 894059-901894 Capsella rubella
Carub.0003s0278 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 894059-899058 Capsella rubella
Carub.0003s0278 10.0kb upstream 10.0kb upstream 12836 true scaffold_3: 899059-911894 Capsella rubella
Carub.0003s0278 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 901895-911894 Capsella rubella
Carub.0003s0278 10.0kb downstream 10.0kb downstream 12836 true scaffold_3: 889059-901894 Capsella rubella
Carub.0003s0278 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 889059-899058 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363135 5261 Brassicaceae View MSA
123839993 5264 Brassicales-Malvales View MSA
124339078 5266 SBM View MSA
124249163 5268 Malvidae View MSA
124066814 5270 Rosid View MSA
123744477 5271 Pentapetalae View MSA
122791192 5272 Eudicot View MSA
122050429 5273 Angiosperm View MSA
121311902 5274 Embryophyte View MSA
123349133 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain