Gene : Carub.0003s0279 C. rubella v1.1
Defline:  (1 of 1) PTHR10314:SF90 - S-SULFOCYSTEINE SYNTHASE, CHLOROPLASTIC-RELATED Genomic Order:  279
Name:  ? Carub.0003s0279 Secondary Identifier:  ? PAC:39239397
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella CYSTSYN-PWY Capsella rubella pathologic  
Crubella PWY-6936 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0279 0.5kb upstream 0.5kb upstream 2950 true scaffold_3: 903129-906078 Capsella rubella
Carub.0003s0279 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 905579-906078 Capsella rubella
Carub.0003s0279 0.5kb downstream 0.5kb downstream 2950 true scaffold_3: 902629-905578 Capsella rubella
Carub.0003s0279 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 902629-903128 Capsella rubella
Carub.0003s0279 1.0kb upstream 1.0kb upstream 3450 true scaffold_3: 903129-906578 Capsella rubella
Carub.0003s0279 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 905579-906578 Capsella rubella
Carub.0003s0279 1.0kb downstream 1.0kb downstream 3450 true scaffold_3: 902129-905578 Capsella rubella
Carub.0003s0279 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 902129-903128 Capsella rubella
Carub.0003s0279 2.0kb upstream 2.0kb upstream 4450 true scaffold_3: 903129-907578 Capsella rubella
Carub.0003s0279 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 905579-907578 Capsella rubella
Carub.0003s0279 2.0kb downstream 2.0kb downstream 4450 true scaffold_3: 901129-905578 Capsella rubella
Carub.0003s0279 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 901129-903128 Capsella rubella
Carub.0003s0279 5.0kb upstream 5.0kb upstream 7450 true scaffold_3: 903129-910578 Capsella rubella
Carub.0003s0279 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 905579-910578 Capsella rubella
Carub.0003s0279 5.0kb downstream 5.0kb downstream 7450 true scaffold_3: 898129-905578 Capsella rubella
Carub.0003s0279 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 898129-903128 Capsella rubella
Carub.0003s0279 10.0kb upstream 10.0kb upstream 12450 true scaffold_3: 903129-915578 Capsella rubella
Carub.0003s0279 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 905579-915578 Capsella rubella
Carub.0003s0279 10.0kb downstream 10.0kb downstream 12450 true scaffold_3: 893129-905578 Capsella rubella
Carub.0003s0279 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 893129-903128 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368867 5261 Brassicaceae View MSA
123829970 5264 Brassicales-Malvales View MSA
124341631 5266 SBM View MSA
124240411 5268 Malvidae View MSA
124067965 5270 Rosid View MSA
123741617 5271 Pentapetalae View MSA
122788921 5272 Eudicot View MSA
122042312 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain