Gene : Carub.0003s0272 C. rubella v1.1
Defline:  (1 of 2) PF12070 - Protein of unknown function (DUF3550/UPF0682) (DUF3550) Genomic Order:  272
Name:  ? Carub.0003s0272 Secondary Identifier:  ? PAC:39241878
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0272 0.5kb upstream 0.5kb upstream 4516 true scaffold_3: 872869-877384 Capsella rubella
Carub.0003s0272 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 872869-873368 Capsella rubella
Carub.0003s0272 0.5kb downstream 0.5kb downstream 4516 true scaffold_3: 873369-877884 Capsella rubella
Carub.0003s0272 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 877385-877884 Capsella rubella
Carub.0003s0272 1.0kb upstream 1.0kb upstream 5016 true scaffold_3: 872369-877384 Capsella rubella
Carub.0003s0272 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 872369-873368 Capsella rubella
Carub.0003s0272 1.0kb downstream 1.0kb downstream 5016 true scaffold_3: 873369-878384 Capsella rubella
Carub.0003s0272 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 877385-878384 Capsella rubella
Carub.0003s0272 2.0kb upstream 2.0kb upstream 6016 true scaffold_3: 871369-877384 Capsella rubella
Carub.0003s0272 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 871369-873368 Capsella rubella
Carub.0003s0272 2.0kb downstream 2.0kb downstream 6016 true scaffold_3: 873369-879384 Capsella rubella
Carub.0003s0272 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 877385-879384 Capsella rubella
Carub.0003s0272 5.0kb upstream 5.0kb upstream 9016 true scaffold_3: 868369-877384 Capsella rubella
Carub.0003s0272 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 868369-873368 Capsella rubella
Carub.0003s0272 5.0kb downstream 5.0kb downstream 9016 true scaffold_3: 873369-882384 Capsella rubella
Carub.0003s0272 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 877385-882384 Capsella rubella
Carub.0003s0272 10.0kb upstream 10.0kb upstream 14016 true scaffold_3: 863369-877384 Capsella rubella
Carub.0003s0272 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 863369-873368 Capsella rubella
Carub.0003s0272 10.0kb downstream 10.0kb downstream 14016 true scaffold_3: 873369-887384 Capsella rubella
Carub.0003s0272 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 877385-887384 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372658 5261 Brassicaceae View MSA
123828245 5264 Brassicales-Malvales View MSA
124344029 5266 SBM View MSA
124242831 5268 Malvidae View MSA
124066790 5270 Rosid View MSA
123739953 5271 Pentapetalae View MSA
122791908 5272 Eudicot View MSA
122047130 5273 Angiosperm View MSA
121349803 5274 Embryophyte View MSA
123425537 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain