Gene : Carub.0003s0315 C. rubella v1.1
Defline:  (1 of 3) 1.4.1.3 - Glutamate dehydrogenase (NAD(P)(+)) / Glutamic dehydrogenase Genomic Order:  315
Name:  ? Carub.0003s0315 Secondary Identifier:  ? PAC:39239791
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ARGININE-SYN4-PWY Capsella rubella pathologic  
Crubella GLUDEG-I-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0315 0.5kb upstream 0.5kb upstream 2621 true scaffold_3: 1032553-1035173 Capsella rubella
Carub.0003s0315 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1032553-1033052 Capsella rubella
Carub.0003s0315 0.5kb downstream 0.5kb downstream 2621 true scaffold_3: 1033053-1035673 Capsella rubella
Carub.0003s0315 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1035174-1035673 Capsella rubella
Carub.0003s0315 1.0kb upstream 1.0kb upstream 3121 true scaffold_3: 1032053-1035173 Capsella rubella
Carub.0003s0315 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1032053-1033052 Capsella rubella
Carub.0003s0315 1.0kb downstream 1.0kb downstream 3121 true scaffold_3: 1033053-1036173 Capsella rubella
Carub.0003s0315 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1035174-1036173 Capsella rubella
Carub.0003s0315 2.0kb upstream 2.0kb upstream 4121 true scaffold_3: 1031053-1035173 Capsella rubella
Carub.0003s0315 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1031053-1033052 Capsella rubella
Carub.0003s0315 2.0kb downstream 2.0kb downstream 4121 true scaffold_3: 1033053-1037173 Capsella rubella
Carub.0003s0315 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1035174-1037173 Capsella rubella
Carub.0003s0315 5.0kb upstream 5.0kb upstream 7121 true scaffold_3: 1028053-1035173 Capsella rubella
Carub.0003s0315 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1028053-1033052 Capsella rubella
Carub.0003s0315 5.0kb downstream 5.0kb downstream 7121 true scaffold_3: 1033053-1040173 Capsella rubella
Carub.0003s0315 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1035174-1040173 Capsella rubella
Carub.0003s0315 10.0kb upstream 10.0kb upstream 12121 true scaffold_3: 1023053-1035173 Capsella rubella
Carub.0003s0315 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1023053-1033052 Capsella rubella
Carub.0003s0315 10.0kb downstream 10.0kb downstream 12121 true scaffold_3: 1033053-1045173 Capsella rubella
Carub.0003s0315 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1035174-1045173 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372425 5261 Brassicaceae View MSA
123840705 5264 Brassicales-Malvales View MSA
124341607 5266 SBM View MSA
124244105 5268 Malvidae View MSA
124067187 5270 Rosid View MSA
123747810 5271 Pentapetalae View MSA
122788460 5272 Eudicot View MSA
122043764 5273 Angiosperm View MSA
121350758 5274 Embryophyte View MSA
123427828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain