Gene : Carub.0003s0001 C. rubella v1.1
Defline:  (1 of 1) PTHR12419//PTHR12419:SF3 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1
Name:  ? Carub.0003s0001 Secondary Identifier:  ? PAC:39241225
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0001 0.5kb upstream 0.5kb upstream 3062 true scaffold_3: 1944-5005 Capsella rubella
Carub.0003s0001 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4506-5005 Capsella rubella
Carub.0003s0001 0.5kb downstream 0.5kb downstream 3062 true scaffold_3: 1444-4505 Capsella rubella
Carub.0003s0001 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1444-1943 Capsella rubella
Carub.0003s0001 1.0kb upstream 1.0kb upstream 3562 true scaffold_3: 1944-5505 Capsella rubella
Carub.0003s0001 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4506-5505 Capsella rubella
Carub.0003s0001 1.0kb downstream 1.0kb downstream 3562 true scaffold_3: 944-4505 Capsella rubella
Carub.0003s0001 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 944-1943 Capsella rubella
Carub.0003s0001 2.0kb upstream 2.0kb upstream 4562 true scaffold_3: 1944-6505 Capsella rubella
Carub.0003s0001 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4506-6505 Capsella rubella
Carub.0003s0001 2.0kb downstream 2.0kb downstream 4505 true scaffold_3: 1-4505 Capsella rubella
Carub.0003s0001 2.0kb downstream 2.0kb downstream 1943 false scaffold_3: 1-1943 Capsella rubella
Carub.0003s0001 5.0kb upstream 5.0kb upstream 7562 true scaffold_3: 1944-9505 Capsella rubella
Carub.0003s0001 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4506-9505 Capsella rubella
Carub.0003s0001 5.0kb downstream 5.0kb downstream 4505 true scaffold_3: 1-4505 Capsella rubella
Carub.0003s0001 5.0kb downstream 5.0kb downstream 1943 false scaffold_3: 1-1943 Capsella rubella
Carub.0003s0001 10.0kb upstream 10.0kb upstream 12562 true scaffold_3: 1944-14505 Capsella rubella
Carub.0003s0001 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4506-14505 Capsella rubella
Carub.0003s0001 10.0kb downstream 10.0kb downstream 4505 true scaffold_3: 1-4505 Capsella rubella
Carub.0003s0001 10.0kb downstream 10.0kb downstream 1943 false scaffold_3: 1-1943 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377423 5261 Brassicaceae View MSA
123840223 5264 Brassicales-Malvales View MSA
124340656 5266 SBM View MSA
124239672 5268 Malvidae View MSA
124068845 5270 Rosid View MSA
123751936 5271 Pentapetalae View MSA
122788372 5272 Eudicot View MSA
122048999 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain