Gene : Carub.0003s0021 C. rubella v1.1

Genomic Order:  21 Name:  ? Carub.0003s0021
Secondary Identifier:  ? PAC:39240925

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0021 0.5kb upstream 0.5kb upstream 2405 true scaffold_3: 58094-60498 Capsella rubella
Carub.0003s0021 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 59999-60498 Capsella rubella
Carub.0003s0021 0.5kb downstream 0.5kb downstream 2405 true scaffold_3: 57594-59998 Capsella rubella
Carub.0003s0021 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 57594-58093 Capsella rubella
Carub.0003s0021 1.0kb upstream 1.0kb upstream 2905 true scaffold_3: 58094-60998 Capsella rubella
Carub.0003s0021 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 59999-60998 Capsella rubella
Carub.0003s0021 1.0kb downstream 1.0kb downstream 2905 true scaffold_3: 57094-59998 Capsella rubella
Carub.0003s0021 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 57094-58093 Capsella rubella
Carub.0003s0021 2.0kb upstream 2.0kb upstream 3905 true scaffold_3: 58094-61998 Capsella rubella
Carub.0003s0021 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 59999-61998 Capsella rubella
Carub.0003s0021 2.0kb downstream 2.0kb downstream 3905 true scaffold_3: 56094-59998 Capsella rubella
Carub.0003s0021 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 56094-58093 Capsella rubella
Carub.0003s0021 5.0kb upstream 5.0kb upstream 6905 true scaffold_3: 58094-64998 Capsella rubella
Carub.0003s0021 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 59999-64998 Capsella rubella
Carub.0003s0021 5.0kb downstream 5.0kb downstream 6905 true scaffold_3: 53094-59998 Capsella rubella
Carub.0003s0021 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 53094-58093 Capsella rubella
Carub.0003s0021 10.0kb upstream 10.0kb upstream 11905 true scaffold_3: 58094-69998 Capsella rubella
Carub.0003s0021 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 59999-69998 Capsella rubella
Carub.0003s0021 10.0kb downstream 10.0kb downstream 11905 true scaffold_3: 48094-59998 Capsella rubella
Carub.0003s0021 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 48094-58093 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369759 5261 Brassicaceae View MSA
123838349 5264 Brassicales-Malvales View MSA
124337018 5266 SBM View MSA
124253196 5268 Malvidae View MSA
124073179 5270 Rosid View MSA
123752262 5271 Pentapetalae View MSA
122794539 5272 Eudicot View MSA
122050080 5273 Angiosperm View MSA
121311726 5274 Embryophyte View MSA
123348985 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain