Gene : Carub.0003s0051 C. rubella v1.1
Defline:  (1 of 3) PF07223 - Protein of unknown function (DUF1421) (DUF1421) Genomic Order:  51
Name:  ? Carub.0003s0051 Secondary Identifier:  ? PAC:39242422
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0051 0.5kb upstream 0.5kb upstream 2436 true scaffold_3: 145533-147968 Capsella rubella
Carub.0003s0051 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 147469-147968 Capsella rubella
Carub.0003s0051 0.5kb downstream 0.5kb downstream 2436 true scaffold_3: 145033-147468 Capsella rubella
Carub.0003s0051 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 145033-145532 Capsella rubella
Carub.0003s0051 1.0kb upstream 1.0kb upstream 2936 true scaffold_3: 145533-148468 Capsella rubella
Carub.0003s0051 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 147469-148468 Capsella rubella
Carub.0003s0051 1.0kb downstream 1.0kb downstream 2936 true scaffold_3: 144533-147468 Capsella rubella
Carub.0003s0051 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 144533-145532 Capsella rubella
Carub.0003s0051 2.0kb upstream 2.0kb upstream 3936 true scaffold_3: 145533-149468 Capsella rubella
Carub.0003s0051 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 147469-149468 Capsella rubella
Carub.0003s0051 2.0kb downstream 2.0kb downstream 3936 true scaffold_3: 143533-147468 Capsella rubella
Carub.0003s0051 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 143533-145532 Capsella rubella
Carub.0003s0051 5.0kb upstream 5.0kb upstream 6936 true scaffold_3: 145533-152468 Capsella rubella
Carub.0003s0051 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 147469-152468 Capsella rubella
Carub.0003s0051 5.0kb downstream 5.0kb downstream 6936 true scaffold_3: 140533-147468 Capsella rubella
Carub.0003s0051 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 140533-145532 Capsella rubella
Carub.0003s0051 10.0kb upstream 10.0kb upstream 11936 true scaffold_3: 145533-157468 Capsella rubella
Carub.0003s0051 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 147469-157468 Capsella rubella
Carub.0003s0051 10.0kb downstream 10.0kb downstream 11936 true scaffold_3: 135533-147468 Capsella rubella
Carub.0003s0051 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 135533-145532 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378366 5261 Brassicaceae View MSA
123829411 5264 Brassicales-Malvales View MSA
124346083 5266 SBM View MSA
124245870 5268 Malvidae View MSA
124072607 5270 Rosid View MSA
123737243 5271 Pentapetalae View MSA
122792477 5272 Eudicot View MSA
122050948 5273 Angiosperm View MSA
121350556 5274 Embryophyte View MSA
123427524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain