Gene : Carub.0003s1517 C. rubella v1.1
Defline:  (1 of 3) PTHR11772//PTHR11772:SF14 - ASPARAGINE SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  1517
Name:  ? Carub.0003s1517 Secondary Identifier:  ? PAC:39241361
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1517 0.5kb upstream 0.5kb upstream 1591 true scaffold_3: 5328233-5329823 Capsella rubella
Carub.0003s1517 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5328233-5328732 Capsella rubella
Carub.0003s1517 0.5kb downstream 0.5kb downstream 1591 true scaffold_3: 5328733-5330323 Capsella rubella
Carub.0003s1517 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5329824-5330323 Capsella rubella
Carub.0003s1517 1.0kb upstream 1.0kb upstream 2091 true scaffold_3: 5327733-5329823 Capsella rubella
Carub.0003s1517 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5327733-5328732 Capsella rubella
Carub.0003s1517 1.0kb downstream 1.0kb downstream 2091 true scaffold_3: 5328733-5330823 Capsella rubella
Carub.0003s1517 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5329824-5330823 Capsella rubella
Carub.0003s1517 2.0kb upstream 2.0kb upstream 3091 true scaffold_3: 5326733-5329823 Capsella rubella
Carub.0003s1517 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5326733-5328732 Capsella rubella
Carub.0003s1517 2.0kb downstream 2.0kb downstream 3091 true scaffold_3: 5328733-5331823 Capsella rubella
Carub.0003s1517 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5329824-5331823 Capsella rubella
Carub.0003s1517 5.0kb upstream 5.0kb upstream 6091 true scaffold_3: 5323733-5329823 Capsella rubella
Carub.0003s1517 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5323733-5328732 Capsella rubella
Carub.0003s1517 5.0kb downstream 5.0kb downstream 6091 true scaffold_3: 5328733-5334823 Capsella rubella
Carub.0003s1517 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5329824-5334823 Capsella rubella
Carub.0003s1517 10.0kb upstream 10.0kb upstream 11091 true scaffold_3: 5318733-5329823 Capsella rubella
Carub.0003s1517 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5318733-5328732 Capsella rubella
Carub.0003s1517 10.0kb downstream 10.0kb downstream 11091 true scaffold_3: 5328733-5339823 Capsella rubella
Carub.0003s1517 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5329824-5339823 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373792 5261 Brassicaceae View MSA
123800621 5264 Brassicales-Malvales View MSA
124298015 5266 SBM View MSA
124149763 5268 Malvidae View MSA
123875504 5270 Rosid View MSA
123746642 5271 Pentapetalae View MSA
122787862 5272 Eudicot View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain