Gene : Carub.0003s1531 C. rubella v1.1
Defline:  (1 of 2) PTHR32370:SF16 - NON-PHOTOTROPIC HYPOCOTYL-LIKE PROTEIN Genomic Order:  1531
Name:  ? Carub.0003s1531 Secondary Identifier:  ? PAC:39242951
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1531 0.5kb upstream 0.5kb upstream 2054 true scaffold_3: 5407144-5409197 Capsella rubella
Carub.0003s1531 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5408698-5409197 Capsella rubella
Carub.0003s1531 0.5kb downstream 0.5kb downstream 2054 true scaffold_3: 5406644-5408697 Capsella rubella
Carub.0003s1531 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5406644-5407143 Capsella rubella
Carub.0003s1531 1.0kb upstream 1.0kb upstream 2554 true scaffold_3: 5407144-5409697 Capsella rubella
Carub.0003s1531 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5408698-5409697 Capsella rubella
Carub.0003s1531 1.0kb downstream 1.0kb downstream 2554 true scaffold_3: 5406144-5408697 Capsella rubella
Carub.0003s1531 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5406144-5407143 Capsella rubella
Carub.0003s1531 2.0kb upstream 2.0kb upstream 3554 true scaffold_3: 5407144-5410697 Capsella rubella
Carub.0003s1531 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5408698-5410697 Capsella rubella
Carub.0003s1531 2.0kb downstream 2.0kb downstream 3554 true scaffold_3: 5405144-5408697 Capsella rubella
Carub.0003s1531 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5405144-5407143 Capsella rubella
Carub.0003s1531 5.0kb upstream 5.0kb upstream 6554 true scaffold_3: 5407144-5413697 Capsella rubella
Carub.0003s1531 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5408698-5413697 Capsella rubella
Carub.0003s1531 5.0kb downstream 5.0kb downstream 6554 true scaffold_3: 5402144-5408697 Capsella rubella
Carub.0003s1531 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5402144-5407143 Capsella rubella
Carub.0003s1531 10.0kb upstream 10.0kb upstream 11554 true scaffold_3: 5407144-5418697 Capsella rubella
Carub.0003s1531 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5408698-5418697 Capsella rubella
Carub.0003s1531 10.0kb downstream 10.0kb downstream 11554 true scaffold_3: 5397144-5408697 Capsella rubella
Carub.0003s1531 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5397144-5407143 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368795 5261 Brassicaceae View MSA
123827663 5264 Brassicales-Malvales View MSA
124345592 5266 SBM View MSA
124250856 5268 Malvidae View MSA
124065820 5270 Rosid View MSA
123742198 5271 Pentapetalae View MSA
122787661 5272 Eudicot View MSA
122051145 5273 Angiosperm View MSA
121347829 5274 Embryophyte View MSA
123380647 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain