Gene : Carub.0003s1557 C. rubella v1.1
Defline:  (1 of 2) PF14378 - PAP2 superfamily (PAP2_3) Genomic Order:  1557
Name:  ? Carub.0003s1557 Secondary Identifier:  ? PAC:39239637
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1557 0.5kb upstream 0.5kb upstream 2073 true scaffold_3: 5490100-5492172 Capsella rubella
Carub.0003s1557 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5490100-5490599 Capsella rubella
Carub.0003s1557 0.5kb downstream 0.5kb downstream 2073 true scaffold_3: 5490600-5492672 Capsella rubella
Carub.0003s1557 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5492173-5492672 Capsella rubella
Carub.0003s1557 1.0kb upstream 1.0kb upstream 2573 true scaffold_3: 5489600-5492172 Capsella rubella
Carub.0003s1557 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5489600-5490599 Capsella rubella
Carub.0003s1557 1.0kb downstream 1.0kb downstream 2573 true scaffold_3: 5490600-5493172 Capsella rubella
Carub.0003s1557 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5492173-5493172 Capsella rubella
Carub.0003s1557 2.0kb upstream 2.0kb upstream 3573 true scaffold_3: 5488600-5492172 Capsella rubella
Carub.0003s1557 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5488600-5490599 Capsella rubella
Carub.0003s1557 2.0kb downstream 2.0kb downstream 3573 true scaffold_3: 5490600-5494172 Capsella rubella
Carub.0003s1557 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5492173-5494172 Capsella rubella
Carub.0003s1557 5.0kb upstream 5.0kb upstream 6573 true scaffold_3: 5485600-5492172 Capsella rubella
Carub.0003s1557 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5485600-5490599 Capsella rubella
Carub.0003s1557 5.0kb downstream 5.0kb downstream 6573 true scaffold_3: 5490600-5497172 Capsella rubella
Carub.0003s1557 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5492173-5497172 Capsella rubella
Carub.0003s1557 10.0kb upstream 10.0kb upstream 11573 true scaffold_3: 5480600-5492172 Capsella rubella
Carub.0003s1557 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5480600-5490599 Capsella rubella
Carub.0003s1557 10.0kb downstream 10.0kb downstream 11573 true scaffold_3: 5490600-5502172 Capsella rubella
Carub.0003s1557 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5492173-5502172 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029092 5273 Angiosperm View MSA
122381624 5261 Brassicaceae View MSA
123827655 5264 Brassicales-Malvales View MSA
124345808 5266 SBM View MSA
124242573 5268 Malvidae View MSA
124065799 5270 Rosid View MSA
123741038 5271 Pentapetalae View MSA
122789813 5272 Eudicot View MSA
121348146 5274 Embryophyte View MSA
123380744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain