Gene : Carub.0003s1556 C. rubella v1.1
Defline:  (1 of 2) PF14378 - PAP2 superfamily (PAP2_3) Genomic Order:  1556
Name:  ? Carub.0003s1556 Secondary Identifier:  ? PAC:39240312
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1556 0.5kb upstream 0.5kb upstream 3126 true scaffold_3: 5486153-5489278 Capsella rubella
Carub.0003s1556 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5486153-5486652 Capsella rubella
Carub.0003s1556 0.5kb downstream 0.5kb downstream 3126 true scaffold_3: 5486653-5489778 Capsella rubella
Carub.0003s1556 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5489279-5489778 Capsella rubella
Carub.0003s1556 1.0kb upstream 1.0kb upstream 3626 true scaffold_3: 5485653-5489278 Capsella rubella
Carub.0003s1556 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5485653-5486652 Capsella rubella
Carub.0003s1556 1.0kb downstream 1.0kb downstream 3626 true scaffold_3: 5486653-5490278 Capsella rubella
Carub.0003s1556 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5489279-5490278 Capsella rubella
Carub.0003s1556 2.0kb upstream 2.0kb upstream 4626 true scaffold_3: 5484653-5489278 Capsella rubella
Carub.0003s1556 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5484653-5486652 Capsella rubella
Carub.0003s1556 2.0kb downstream 2.0kb downstream 4626 true scaffold_3: 5486653-5491278 Capsella rubella
Carub.0003s1556 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5489279-5491278 Capsella rubella
Carub.0003s1556 5.0kb upstream 5.0kb upstream 7626 true scaffold_3: 5481653-5489278 Capsella rubella
Carub.0003s1556 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5481653-5486652 Capsella rubella
Carub.0003s1556 5.0kb downstream 5.0kb downstream 7626 true scaffold_3: 5486653-5494278 Capsella rubella
Carub.0003s1556 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5489279-5494278 Capsella rubella
Carub.0003s1556 10.0kb upstream 10.0kb upstream 12626 true scaffold_3: 5476653-5489278 Capsella rubella
Carub.0003s1556 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5476653-5486652 Capsella rubella
Carub.0003s1556 10.0kb downstream 10.0kb downstream 12626 true scaffold_3: 5486653-5499278 Capsella rubella
Carub.0003s1556 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5489279-5499278 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029092 5273 Angiosperm View MSA
122381624 5261 Brassicaceae View MSA
123827655 5264 Brassicales-Malvales View MSA
124345808 5266 SBM View MSA
124242573 5268 Malvidae View MSA
124065799 5270 Rosid View MSA
123741038 5271 Pentapetalae View MSA
122789813 5272 Eudicot View MSA
121348146 5274 Embryophyte View MSA
123380744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain