Gene : Carub.0003s1774 C. rubella v1.1
Defline:  (1 of 1) 4.1.1.36 - Phosphopantothenoylcysteine decarboxylase / N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase Genomic Order:  1774
Name:  ? Carub.0003s1774 Secondary Identifier:  ? PAC:39239337
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella COA-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1774 0.5kb upstream 0.5kb upstream 1586 true scaffold_3: 6285334-6286919 Capsella rubella
Carub.0003s1774 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6286420-6286919 Capsella rubella
Carub.0003s1774 0.5kb downstream 0.5kb downstream 1586 true scaffold_3: 6284834-6286419 Capsella rubella
Carub.0003s1774 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6284834-6285333 Capsella rubella
Carub.0003s1774 1.0kb upstream 1.0kb upstream 2086 true scaffold_3: 6285334-6287419 Capsella rubella
Carub.0003s1774 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6286420-6287419 Capsella rubella
Carub.0003s1774 1.0kb downstream 1.0kb downstream 2086 true scaffold_3: 6284334-6286419 Capsella rubella
Carub.0003s1774 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6284334-6285333 Capsella rubella
Carub.0003s1774 2.0kb upstream 2.0kb upstream 3086 true scaffold_3: 6285334-6288419 Capsella rubella
Carub.0003s1774 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6286420-6288419 Capsella rubella
Carub.0003s1774 2.0kb downstream 2.0kb downstream 3086 true scaffold_3: 6283334-6286419 Capsella rubella
Carub.0003s1774 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6283334-6285333 Capsella rubella
Carub.0003s1774 5.0kb upstream 5.0kb upstream 6086 true scaffold_3: 6285334-6291419 Capsella rubella
Carub.0003s1774 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6286420-6291419 Capsella rubella
Carub.0003s1774 5.0kb downstream 5.0kb downstream 6086 true scaffold_3: 6280334-6286419 Capsella rubella
Carub.0003s1774 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6280334-6285333 Capsella rubella
Carub.0003s1774 10.0kb upstream 10.0kb upstream 11086 true scaffold_3: 6285334-6296419 Capsella rubella
Carub.0003s1774 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6286420-6296419 Capsella rubella
Carub.0003s1774 10.0kb downstream 10.0kb downstream 11086 true scaffold_3: 6275334-6286419 Capsella rubella
Carub.0003s1774 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6275334-6285333 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361145 5261 Brassicaceae View MSA
123840077 5264 Brassicales-Malvales View MSA
124350306 5266 SBM View MSA
124242007 5268 Malvidae View MSA
124065086 5270 Rosid View MSA
123739959 5271 Pentapetalae View MSA
122787988 5272 Eudicot View MSA
122043934 5273 Angiosperm View MSA
121347279 5274 Embryophyte View MSA
123427433 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain