Gene : Carub.0003s1328 C. rubella v1.1
Defline:  (1 of 1) PF12854//PF13041//PF14432 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  1328
Name:  ? Carub.0003s1328 Secondary Identifier:  ? PAC:39240473
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1328 0.5kb upstream 0.5kb upstream 2405 true scaffold_3: 4609332-4611736 Capsella rubella
Carub.0003s1328 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4609332-4609831 Capsella rubella
Carub.0003s1328 0.5kb downstream 0.5kb downstream 2405 true scaffold_3: 4609832-4612236 Capsella rubella
Carub.0003s1328 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4611737-4612236 Capsella rubella
Carub.0003s1328 1.0kb upstream 1.0kb upstream 2905 true scaffold_3: 4608832-4611736 Capsella rubella
Carub.0003s1328 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4608832-4609831 Capsella rubella
Carub.0003s1328 1.0kb downstream 1.0kb downstream 2905 true scaffold_3: 4609832-4612736 Capsella rubella
Carub.0003s1328 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4611737-4612736 Capsella rubella
Carub.0003s1328 2.0kb upstream 2.0kb upstream 3905 true scaffold_3: 4607832-4611736 Capsella rubella
Carub.0003s1328 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4607832-4609831 Capsella rubella
Carub.0003s1328 2.0kb downstream 2.0kb downstream 3905 true scaffold_3: 4609832-4613736 Capsella rubella
Carub.0003s1328 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4611737-4613736 Capsella rubella
Carub.0003s1328 5.0kb upstream 5.0kb upstream 6905 true scaffold_3: 4604832-4611736 Capsella rubella
Carub.0003s1328 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4604832-4609831 Capsella rubella
Carub.0003s1328 5.0kb downstream 5.0kb downstream 6905 true scaffold_3: 4609832-4616736 Capsella rubella
Carub.0003s1328 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4611737-4616736 Capsella rubella
Carub.0003s1328 10.0kb upstream 10.0kb upstream 11905 true scaffold_3: 4599832-4611736 Capsella rubella
Carub.0003s1328 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4599832-4609831 Capsella rubella
Carub.0003s1328 10.0kb downstream 10.0kb downstream 11905 true scaffold_3: 4609832-4621736 Capsella rubella
Carub.0003s1328 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4611737-4621736 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027491 5273 Angiosperm View MSA
122365420 5261 Brassicaceae View MSA
123827574 5264 Brassicales-Malvales View MSA
124342952 5266 SBM View MSA
124241472 5268 Malvidae View MSA
124074788 5270 Rosid View MSA
123753025 5271 Pentapetalae View MSA
122794671 5272 Eudicot View MSA
121352423 5274 Embryophyte View MSA
123382766 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain