Gene : Carub.0003s1364 C. rubella v1.1
Defline:  (1 of 2) 2.7.6.5//3.2.1.37//3.2.1.55 - GTP diphosphokinase / Stringent factor // Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase Genomic Order:  1364
Name:  ? Carub.0003s1364 Secondary Identifier:  ? PAC:39240984
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1364 0.5kb upstream 0.5kb upstream 3515 true scaffold_3: 4762468-4765982 Capsella rubella
Carub.0003s1364 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4765483-4765982 Capsella rubella
Carub.0003s1364 0.5kb downstream 0.5kb downstream 3515 true scaffold_3: 4761968-4765482 Capsella rubella
Carub.0003s1364 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4761968-4762467 Capsella rubella
Carub.0003s1364 1.0kb upstream 1.0kb upstream 4015 true scaffold_3: 4762468-4766482 Capsella rubella
Carub.0003s1364 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4765483-4766482 Capsella rubella
Carub.0003s1364 1.0kb downstream 1.0kb downstream 4015 true scaffold_3: 4761468-4765482 Capsella rubella
Carub.0003s1364 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4761468-4762467 Capsella rubella
Carub.0003s1364 2.0kb upstream 2.0kb upstream 5015 true scaffold_3: 4762468-4767482 Capsella rubella
Carub.0003s1364 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4765483-4767482 Capsella rubella
Carub.0003s1364 2.0kb downstream 2.0kb downstream 5015 true scaffold_3: 4760468-4765482 Capsella rubella
Carub.0003s1364 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4760468-4762467 Capsella rubella
Carub.0003s1364 5.0kb upstream 5.0kb upstream 8015 true scaffold_3: 4762468-4770482 Capsella rubella
Carub.0003s1364 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4765483-4770482 Capsella rubella
Carub.0003s1364 5.0kb downstream 5.0kb downstream 8015 true scaffold_3: 4757468-4765482 Capsella rubella
Carub.0003s1364 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4757468-4762467 Capsella rubella
Carub.0003s1364 10.0kb upstream 10.0kb upstream 13015 true scaffold_3: 4762468-4775482 Capsella rubella
Carub.0003s1364 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4765483-4775482 Capsella rubella
Carub.0003s1364 10.0kb downstream 10.0kb downstream 13015 true scaffold_3: 4752468-4765482 Capsella rubella
Carub.0003s1364 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4752468-4762467 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372930 5261 Brassicaceae View MSA
123837130 5264 Brassicales-Malvales View MSA
124344190 5266 SBM View MSA
124244390 5268 Malvidae View MSA
124067255 5270 Rosid View MSA
123738848 5271 Pentapetalae View MSA
122789814 5272 Eudicot View MSA
122044078 5273 Angiosperm View MSA
121346145 5274 Embryophyte View MSA
123428478 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain