Gene : Carub.0003s1365 C. rubella v1.1
Defline:  (1 of 2) PTHR34788:SF1 - F15I1.22 Genomic Order:  1365
Name:  ? Carub.0003s1365 Secondary Identifier:  ? PAC:39240116
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1365 0.5kb upstream 0.5kb upstream 1535 true scaffold_3: 4769069-4770603 Capsella rubella
Carub.0003s1365 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4770104-4770603 Capsella rubella
Carub.0003s1365 0.5kb downstream 0.5kb downstream 1535 true scaffold_3: 4768569-4770103 Capsella rubella
Carub.0003s1365 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4768569-4769068 Capsella rubella
Carub.0003s1365 1.0kb upstream 1.0kb upstream 2035 true scaffold_3: 4769069-4771103 Capsella rubella
Carub.0003s1365 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4770104-4771103 Capsella rubella
Carub.0003s1365 1.0kb downstream 1.0kb downstream 2035 true scaffold_3: 4768069-4770103 Capsella rubella
Carub.0003s1365 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4768069-4769068 Capsella rubella
Carub.0003s1365 2.0kb upstream 2.0kb upstream 3035 true scaffold_3: 4769069-4772103 Capsella rubella
Carub.0003s1365 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4770104-4772103 Capsella rubella
Carub.0003s1365 2.0kb downstream 2.0kb downstream 3035 true scaffold_3: 4767069-4770103 Capsella rubella
Carub.0003s1365 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4767069-4769068 Capsella rubella
Carub.0003s1365 5.0kb upstream 5.0kb upstream 6035 true scaffold_3: 4769069-4775103 Capsella rubella
Carub.0003s1365 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4770104-4775103 Capsella rubella
Carub.0003s1365 5.0kb downstream 5.0kb downstream 6035 true scaffold_3: 4764069-4770103 Capsella rubella
Carub.0003s1365 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4764069-4769068 Capsella rubella
Carub.0003s1365 10.0kb upstream 10.0kb upstream 11035 true scaffold_3: 4769069-4780103 Capsella rubella
Carub.0003s1365 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4770104-4780103 Capsella rubella
Carub.0003s1365 10.0kb downstream 10.0kb downstream 11035 true scaffold_3: 4759069-4770103 Capsella rubella
Carub.0003s1365 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4759069-4769068 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026756 5273 Angiosperm View MSA
122363338 5261 Brassicaceae View MSA
123798520 5264 Brassicales-Malvales View MSA
124296146 5266 SBM View MSA
124248033 5268 Malvidae View MSA
124060408 5270 Rosid View MSA
123748070 5271 Pentapetalae View MSA
122790898 5272 Eudicot View MSA
121296533 5274 Embryophyte View MSA
123334681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain