Gene : Carub.0003s1398 C. rubella v1.1
Defline:  (1 of 2) K02729 - 20S proteasome subunit alpha 5 (PSMA5) Genomic Order:  1398
Name:  ? Carub.0003s1398 Secondary Identifier:  ? PAC:39239230
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1398 0.5kb upstream 0.5kb upstream 2928 true scaffold_3: 4884397-4887324 Capsella rubella
Carub.0003s1398 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4884397-4884896 Capsella rubella
Carub.0003s1398 0.5kb downstream 0.5kb downstream 2928 true scaffold_3: 4884897-4887824 Capsella rubella
Carub.0003s1398 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4887325-4887824 Capsella rubella
Carub.0003s1398 1.0kb upstream 1.0kb upstream 3428 true scaffold_3: 4883897-4887324 Capsella rubella
Carub.0003s1398 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4883897-4884896 Capsella rubella
Carub.0003s1398 1.0kb downstream 1.0kb downstream 3428 true scaffold_3: 4884897-4888324 Capsella rubella
Carub.0003s1398 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4887325-4888324 Capsella rubella
Carub.0003s1398 2.0kb upstream 2.0kb upstream 4428 true scaffold_3: 4882897-4887324 Capsella rubella
Carub.0003s1398 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4882897-4884896 Capsella rubella
Carub.0003s1398 2.0kb downstream 2.0kb downstream 4428 true scaffold_3: 4884897-4889324 Capsella rubella
Carub.0003s1398 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4887325-4889324 Capsella rubella
Carub.0003s1398 5.0kb upstream 5.0kb upstream 7428 true scaffold_3: 4879897-4887324 Capsella rubella
Carub.0003s1398 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4879897-4884896 Capsella rubella
Carub.0003s1398 5.0kb downstream 5.0kb downstream 7428 true scaffold_3: 4884897-4892324 Capsella rubella
Carub.0003s1398 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4887325-4892324 Capsella rubella
Carub.0003s1398 10.0kb upstream 10.0kb upstream 12428 true scaffold_3: 4874897-4887324 Capsella rubella
Carub.0003s1398 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4874897-4884896 Capsella rubella
Carub.0003s1398 10.0kb downstream 10.0kb downstream 12428 true scaffold_3: 4884897-4897324 Capsella rubella
Carub.0003s1398 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4887325-4897324 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379304 5261 Brassicaceae View MSA
123840672 5264 Brassicales-Malvales View MSA
124336994 5266 SBM View MSA
124242930 5268 Malvidae View MSA
124064376 5270 Rosid View MSA
123750167 5271 Pentapetalae View MSA
122792406 5272 Eudicot View MSA
122044195 5273 Angiosperm View MSA
121347663 5274 Embryophyte View MSA
123428199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain