Gene : Carub.0003s1484 C. rubella v1.1
Defline:  (1 of 1) K02968 - small subunit ribosomal protein S20 (RP-S20, rpsT) Genomic Order:  1484
Name:  ? Carub.0003s1484 Secondary Identifier:  ? PAC:39242775
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1484 0.5kb upstream 0.5kb upstream 2249 true scaffold_3: 5225340-5227588 Capsella rubella
Carub.0003s1484 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5225340-5225839 Capsella rubella
Carub.0003s1484 0.5kb downstream 0.5kb downstream 2249 true scaffold_3: 5225840-5228088 Capsella rubella
Carub.0003s1484 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5227589-5228088 Capsella rubella
Carub.0003s1484 1.0kb upstream 1.0kb upstream 2749 true scaffold_3: 5224840-5227588 Capsella rubella
Carub.0003s1484 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5224840-5225839 Capsella rubella
Carub.0003s1484 1.0kb downstream 1.0kb downstream 2749 true scaffold_3: 5225840-5228588 Capsella rubella
Carub.0003s1484 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5227589-5228588 Capsella rubella
Carub.0003s1484 2.0kb upstream 2.0kb upstream 3749 true scaffold_3: 5223840-5227588 Capsella rubella
Carub.0003s1484 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5223840-5225839 Capsella rubella
Carub.0003s1484 2.0kb downstream 2.0kb downstream 3749 true scaffold_3: 5225840-5229588 Capsella rubella
Carub.0003s1484 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5227589-5229588 Capsella rubella
Carub.0003s1484 5.0kb upstream 5.0kb upstream 6749 true scaffold_3: 5220840-5227588 Capsella rubella
Carub.0003s1484 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5220840-5225839 Capsella rubella
Carub.0003s1484 5.0kb downstream 5.0kb downstream 6749 true scaffold_3: 5225840-5232588 Capsella rubella
Carub.0003s1484 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5227589-5232588 Capsella rubella
Carub.0003s1484 10.0kb upstream 10.0kb upstream 11749 true scaffold_3: 5215840-5227588 Capsella rubella
Carub.0003s1484 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5215840-5225839 Capsella rubella
Carub.0003s1484 10.0kb downstream 10.0kb downstream 11749 true scaffold_3: 5225840-5237588 Capsella rubella
Carub.0003s1484 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5227589-5237588 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027102 5273 Angiosperm View MSA
122368816 5261 Brassicaceae View MSA
123828533 5264 Brassicales-Malvales View MSA
124344981 5266 SBM View MSA
124237575 5268 Malvidae View MSA
124065268 5270 Rosid View MSA
123738976 5271 Pentapetalae View MSA
122785943 5272 Eudicot View MSA
121345926 5274 Embryophyte View MSA
123425445 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain