Gene : Carub.0003s1054 C. rubella v1.1
Defline:  (1 of 4) PTHR13848//PTHR13848:SF5 - FAMILY NOT NAMED // PROTEIN YIPPEE-LIKE Genomic Order:  1054
Name:  ? Carub.0003s1054 Secondary Identifier:  ? PAC:39239213
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1054 0.5kb upstream 0.5kb upstream 2333 true scaffold_3: 3598544-3600876 Capsella rubella
Carub.0003s1054 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3598544-3599043 Capsella rubella
Carub.0003s1054 0.5kb downstream 0.5kb downstream 2333 true scaffold_3: 3599044-3601376 Capsella rubella
Carub.0003s1054 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3600877-3601376 Capsella rubella
Carub.0003s1054 1.0kb upstream 1.0kb upstream 2833 true scaffold_3: 3598044-3600876 Capsella rubella
Carub.0003s1054 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3598044-3599043 Capsella rubella
Carub.0003s1054 1.0kb downstream 1.0kb downstream 2833 true scaffold_3: 3599044-3601876 Capsella rubella
Carub.0003s1054 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3600877-3601876 Capsella rubella
Carub.0003s1054 2.0kb upstream 2.0kb upstream 3833 true scaffold_3: 3597044-3600876 Capsella rubella
Carub.0003s1054 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3597044-3599043 Capsella rubella
Carub.0003s1054 2.0kb downstream 2.0kb downstream 3833 true scaffold_3: 3599044-3602876 Capsella rubella
Carub.0003s1054 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3600877-3602876 Capsella rubella
Carub.0003s1054 5.0kb upstream 5.0kb upstream 6833 true scaffold_3: 3594044-3600876 Capsella rubella
Carub.0003s1054 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3594044-3599043 Capsella rubella
Carub.0003s1054 5.0kb downstream 5.0kb downstream 6833 true scaffold_3: 3599044-3605876 Capsella rubella
Carub.0003s1054 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3600877-3605876 Capsella rubella
Carub.0003s1054 10.0kb upstream 10.0kb upstream 11833 true scaffold_3: 3589044-3600876 Capsella rubella
Carub.0003s1054 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3589044-3599043 Capsella rubella
Carub.0003s1054 10.0kb downstream 10.0kb downstream 11833 true scaffold_3: 3599044-3610876 Capsella rubella
Carub.0003s1054 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3600877-3610876 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364371 5261 Brassicaceae View MSA
123798739 5264 Brassicales-Malvales View MSA
124296335 5266 SBM View MSA
124148515 5268 Malvidae View MSA
123874494 5270 Rosid View MSA
123748773 5271 Pentapetalae View MSA
122791142 5272 Eudicot View MSA
122047992 5273 Angiosperm View MSA
123428914 5275 Viridiplantae View MSA
121350900 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain