Gene : Carub.0003s1060 C. rubella v1.1
Defline:  (1 of 1) PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  1060
Name:  ? Carub.0003s1060 Secondary Identifier:  ? PAC:39239841
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5466 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1060 0.5kb upstream 0.5kb upstream 2830 true scaffold_3: 3623785-3626614 Capsella rubella
Carub.0003s1060 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3626115-3626614 Capsella rubella
Carub.0003s1060 0.5kb downstream 0.5kb downstream 2830 true scaffold_3: 3623285-3626114 Capsella rubella
Carub.0003s1060 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3623285-3623784 Capsella rubella
Carub.0003s1060 1.0kb upstream 1.0kb upstream 3330 true scaffold_3: 3623785-3627114 Capsella rubella
Carub.0003s1060 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3626115-3627114 Capsella rubella
Carub.0003s1060 1.0kb downstream 1.0kb downstream 3330 true scaffold_3: 3622785-3626114 Capsella rubella
Carub.0003s1060 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3622785-3623784 Capsella rubella
Carub.0003s1060 2.0kb upstream 2.0kb upstream 4330 true scaffold_3: 3623785-3628114 Capsella rubella
Carub.0003s1060 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3626115-3628114 Capsella rubella
Carub.0003s1060 2.0kb downstream 2.0kb downstream 4330 true scaffold_3: 3621785-3626114 Capsella rubella
Carub.0003s1060 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3621785-3623784 Capsella rubella
Carub.0003s1060 5.0kb upstream 5.0kb upstream 7330 true scaffold_3: 3623785-3631114 Capsella rubella
Carub.0003s1060 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3626115-3631114 Capsella rubella
Carub.0003s1060 5.0kb downstream 5.0kb downstream 7330 true scaffold_3: 3618785-3626114 Capsella rubella
Carub.0003s1060 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3618785-3623784 Capsella rubella
Carub.0003s1060 10.0kb upstream 10.0kb upstream 12330 true scaffold_3: 3623785-3636114 Capsella rubella
Carub.0003s1060 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3626115-3636114 Capsella rubella
Carub.0003s1060 10.0kb downstream 10.0kb downstream 12330 true scaffold_3: 3613785-3626114 Capsella rubella
Carub.0003s1060 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3613785-3623784 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779717 5273 Angiosperm View MSA
122379994 5261 Brassicaceae View MSA
123837948 5264 Brassicales-Malvales View MSA
124348390 5266 SBM View MSA
124245953 5268 Malvidae View MSA
124070050 5270 Rosid View MSA
123743966 5271 Pentapetalae View MSA
122770838 5272 Eudicot View MSA
121051361 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain