Gene : Carub.0003s1444 C. rubella v1.1
Defline:  (1 of 1) PTHR10791//PTHR10791:SF57 - RAG1-ACTIVATING PROTEIN 1 // SUBFAMILY NOT NAMED Genomic Order:  1444
Name:  ? Carub.0003s1444 Secondary Identifier:  ? PAC:39242100
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1444 0.5kb upstream 0.5kb upstream 2508 true scaffold_3: 5064124-5066631 Capsella rubella
Carub.0003s1444 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5066132-5066631 Capsella rubella
Carub.0003s1444 0.5kb downstream 0.5kb downstream 2508 true scaffold_3: 5063624-5066131 Capsella rubella
Carub.0003s1444 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5063624-5064123 Capsella rubella
Carub.0003s1444 1.0kb upstream 1.0kb upstream 3008 true scaffold_3: 5064124-5067131 Capsella rubella
Carub.0003s1444 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5066132-5067131 Capsella rubella
Carub.0003s1444 1.0kb downstream 1.0kb downstream 3008 true scaffold_3: 5063124-5066131 Capsella rubella
Carub.0003s1444 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5063124-5064123 Capsella rubella
Carub.0003s1444 2.0kb upstream 2.0kb upstream 4008 true scaffold_3: 5064124-5068131 Capsella rubella
Carub.0003s1444 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5066132-5068131 Capsella rubella
Carub.0003s1444 2.0kb downstream 2.0kb downstream 4008 true scaffold_3: 5062124-5066131 Capsella rubella
Carub.0003s1444 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5062124-5064123 Capsella rubella
Carub.0003s1444 5.0kb upstream 5.0kb upstream 7008 true scaffold_3: 5064124-5071131 Capsella rubella
Carub.0003s1444 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5066132-5071131 Capsella rubella
Carub.0003s1444 5.0kb downstream 5.0kb downstream 7008 true scaffold_3: 5059124-5066131 Capsella rubella
Carub.0003s1444 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5059124-5064123 Capsella rubella
Carub.0003s1444 10.0kb upstream 10.0kb upstream 12008 true scaffold_3: 5064124-5076131 Capsella rubella
Carub.0003s1444 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5066132-5076131 Capsella rubella
Carub.0003s1444 10.0kb downstream 10.0kb downstream 12008 true scaffold_3: 5054124-5066131 Capsella rubella
Carub.0003s1444 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5054124-5064123 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369944 5261 Brassicaceae View MSA
123829514 5264 Brassicales-Malvales View MSA
124345539 5266 SBM View MSA
124253954 5268 Malvidae View MSA
124072962 5270 Rosid View MSA
123749486 5271 Pentapetalae View MSA
122796562 5272 Eudicot View MSA
122048091 5273 Angiosperm View MSA
121310847 5274 Embryophyte View MSA
123348232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain