Gene : Carub.0003s1454 C. rubella v1.1
Defline:  (1 of 1) PTHR22952//PTHR22952:SF195 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // DNA-BINDING PROTEIN-LIKE PROTEIN Genomic Order:  1454
Name:  ? Carub.0003s1454 Secondary Identifier:  ? PAC:39239992
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1454 0.5kb upstream 0.5kb upstream 1739 true scaffold_3: 5117703-5119441 Capsella rubella
Carub.0003s1454 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5117703-5118202 Capsella rubella
Carub.0003s1454 0.5kb downstream 0.5kb downstream 1739 true scaffold_3: 5118203-5119941 Capsella rubella
Carub.0003s1454 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5119442-5119941 Capsella rubella
Carub.0003s1454 1.0kb upstream 1.0kb upstream 2239 true scaffold_3: 5117203-5119441 Capsella rubella
Carub.0003s1454 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5117203-5118202 Capsella rubella
Carub.0003s1454 1.0kb downstream 1.0kb downstream 2239 true scaffold_3: 5118203-5120441 Capsella rubella
Carub.0003s1454 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5119442-5120441 Capsella rubella
Carub.0003s1454 2.0kb upstream 2.0kb upstream 3239 true scaffold_3: 5116203-5119441 Capsella rubella
Carub.0003s1454 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5116203-5118202 Capsella rubella
Carub.0003s1454 2.0kb downstream 2.0kb downstream 3239 true scaffold_3: 5118203-5121441 Capsella rubella
Carub.0003s1454 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5119442-5121441 Capsella rubella
Carub.0003s1454 5.0kb upstream 5.0kb upstream 6239 true scaffold_3: 5113203-5119441 Capsella rubella
Carub.0003s1454 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5113203-5118202 Capsella rubella
Carub.0003s1454 5.0kb downstream 5.0kb downstream 6239 true scaffold_3: 5118203-5124441 Capsella rubella
Carub.0003s1454 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5119442-5124441 Capsella rubella
Carub.0003s1454 10.0kb upstream 10.0kb upstream 11239 true scaffold_3: 5108203-5119441 Capsella rubella
Carub.0003s1454 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5108203-5118202 Capsella rubella
Carub.0003s1454 10.0kb downstream 10.0kb downstream 11239 true scaffold_3: 5118203-5129441 Capsella rubella
Carub.0003s1454 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5119442-5129441 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365249 5261 Brassicaceae View MSA
123833422 5264 Brassicales-Malvales View MSA
124343247 5266 SBM View MSA
124246863 5268 Malvidae View MSA
124070916 5270 Rosid View MSA
123746178 5271 Pentapetalae View MSA
122797836 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain