Gene : Carub.0003s1234 C. rubella v1.1
Defline:  (1 of 15) PF04784//PF14389 - Protein of unknown function, DUF547 (DUF547) // Leucine-zipper of ternary complex factor MIP1 (Lzipper-MIP1) Genomic Order:  1234
Name:  ? Carub.0003s1234 Secondary Identifier:  ? PAC:39242945
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1234 0.5kb upstream 0.5kb upstream 4438 true scaffold_3: 4248355-4252792 Capsella rubella
Carub.0003s1234 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4252293-4252792 Capsella rubella
Carub.0003s1234 0.5kb downstream 0.5kb downstream 4438 true scaffold_3: 4247855-4252292 Capsella rubella
Carub.0003s1234 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4247855-4248354 Capsella rubella
Carub.0003s1234 1.0kb upstream 1.0kb upstream 4938 true scaffold_3: 4248355-4253292 Capsella rubella
Carub.0003s1234 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4252293-4253292 Capsella rubella
Carub.0003s1234 1.0kb downstream 1.0kb downstream 4938 true scaffold_3: 4247355-4252292 Capsella rubella
Carub.0003s1234 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4247355-4248354 Capsella rubella
Carub.0003s1234 2.0kb upstream 2.0kb upstream 5938 true scaffold_3: 4248355-4254292 Capsella rubella
Carub.0003s1234 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4252293-4254292 Capsella rubella
Carub.0003s1234 2.0kb downstream 2.0kb downstream 5938 true scaffold_3: 4246355-4252292 Capsella rubella
Carub.0003s1234 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4246355-4248354 Capsella rubella
Carub.0003s1234 5.0kb upstream 5.0kb upstream 8938 true scaffold_3: 4248355-4257292 Capsella rubella
Carub.0003s1234 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4252293-4257292 Capsella rubella
Carub.0003s1234 5.0kb downstream 5.0kb downstream 8938 true scaffold_3: 4243355-4252292 Capsella rubella
Carub.0003s1234 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4243355-4248354 Capsella rubella
Carub.0003s1234 10.0kb upstream 10.0kb upstream 13938 true scaffold_3: 4248355-4262292 Capsella rubella
Carub.0003s1234 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4252293-4262292 Capsella rubella
Carub.0003s1234 10.0kb downstream 10.0kb downstream 13938 true scaffold_3: 4238355-4252292 Capsella rubella
Carub.0003s1234 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4238355-4248354 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367643 5261 Brassicaceae View MSA
123829360 5264 Brassicales-Malvales View MSA
124339548 5266 SBM View MSA
124248467 5268 Malvidae View MSA
124071956 5270 Rosid View MSA
123741480 5271 Pentapetalae View MSA
122796388 5272 Eudicot View MSA
122050370 5273 Angiosperm View MSA
121350596 5274 Embryophyte View MSA
123381815 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain