Gene : Carub.0003s0902 C. rubella v1.1
Defline:  (1 of 1) PTHR23086:SF42 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 9 Genomic Order:  902
Name:  ? Carub.0003s0902 Secondary Identifier:  ? PAC:39239403
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6351 Capsella rubella pathologic  
Crubella PWY-6352 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0902 0.5kb upstream 0.5kb upstream 3886 true scaffold_3: 3076140-3080025 Capsella rubella
Carub.0003s0902 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3079526-3080025 Capsella rubella
Carub.0003s0902 0.5kb downstream 0.5kb downstream 3886 true scaffold_3: 3075640-3079525 Capsella rubella
Carub.0003s0902 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3075640-3076139 Capsella rubella
Carub.0003s0902 1.0kb upstream 1.0kb upstream 4386 true scaffold_3: 3076140-3080525 Capsella rubella
Carub.0003s0902 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3079526-3080525 Capsella rubella
Carub.0003s0902 1.0kb downstream 1.0kb downstream 4386 true scaffold_3: 3075140-3079525 Capsella rubella
Carub.0003s0902 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3075140-3076139 Capsella rubella
Carub.0003s0902 2.0kb upstream 2.0kb upstream 5386 true scaffold_3: 3076140-3081525 Capsella rubella
Carub.0003s0902 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3079526-3081525 Capsella rubella
Carub.0003s0902 2.0kb downstream 2.0kb downstream 5386 true scaffold_3: 3074140-3079525 Capsella rubella
Carub.0003s0902 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3074140-3076139 Capsella rubella
Carub.0003s0902 5.0kb upstream 5.0kb upstream 8386 true scaffold_3: 3076140-3084525 Capsella rubella
Carub.0003s0902 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3079526-3084525 Capsella rubella
Carub.0003s0902 5.0kb downstream 5.0kb downstream 8386 true scaffold_3: 3071140-3079525 Capsella rubella
Carub.0003s0902 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3071140-3076139 Capsella rubella
Carub.0003s0902 10.0kb upstream 10.0kb upstream 13386 true scaffold_3: 3076140-3089525 Capsella rubella
Carub.0003s0902 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3079526-3089525 Capsella rubella
Carub.0003s0902 10.0kb downstream 10.0kb downstream 13386 true scaffold_3: 3066140-3079525 Capsella rubella
Carub.0003s0902 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3066140-3076139 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026416 5273 Angiosperm View MSA
122366855 5261 Brassicaceae View MSA
123828131 5264 Brassicales-Malvales View MSA
124340268 5266 SBM View MSA
124241135 5268 Malvidae View MSA
124066368 5270 Rosid View MSA
123738623 5271 Pentapetalae View MSA
122790616 5272 Eudicot View MSA
121350823 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain