Gene : Carub.0003s0915 C. rubella v1.1
Defline:  (1 of 1) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase Genomic Order:  915
Name:  ? Carub.0003s0915 Secondary Identifier:  ? PAC:39242388
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella BRANCHED-CHAIN-AA-SYN-PWY Capsella rubella pathologic  
Crubella ILEUSYN-PWY Capsella rubella pathologic  
Crubella PWY-3001 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0915 0.5kb upstream 0.5kb upstream 3386 true scaffold_3: 3135478-3138863 Capsella rubella
Carub.0003s0915 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3138364-3138863 Capsella rubella
Carub.0003s0915 0.5kb downstream 0.5kb downstream 3386 true scaffold_3: 3134978-3138363 Capsella rubella
Carub.0003s0915 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3134978-3135477 Capsella rubella
Carub.0003s0915 1.0kb upstream 1.0kb upstream 3886 true scaffold_3: 3135478-3139363 Capsella rubella
Carub.0003s0915 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3138364-3139363 Capsella rubella
Carub.0003s0915 1.0kb downstream 1.0kb downstream 3886 true scaffold_3: 3134478-3138363 Capsella rubella
Carub.0003s0915 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3134478-3135477 Capsella rubella
Carub.0003s0915 2.0kb upstream 2.0kb upstream 4886 true scaffold_3: 3135478-3140363 Capsella rubella
Carub.0003s0915 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3138364-3140363 Capsella rubella
Carub.0003s0915 2.0kb downstream 2.0kb downstream 4886 true scaffold_3: 3133478-3138363 Capsella rubella
Carub.0003s0915 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3133478-3135477 Capsella rubella
Carub.0003s0915 5.0kb upstream 5.0kb upstream 7886 true scaffold_3: 3135478-3143363 Capsella rubella
Carub.0003s0915 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3138364-3143363 Capsella rubella
Carub.0003s0915 5.0kb downstream 5.0kb downstream 7886 true scaffold_3: 3130478-3138363 Capsella rubella
Carub.0003s0915 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3130478-3135477 Capsella rubella
Carub.0003s0915 10.0kb upstream 10.0kb upstream 12886 true scaffold_3: 3135478-3148363 Capsella rubella
Carub.0003s0915 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3138364-3148363 Capsella rubella
Carub.0003s0915 10.0kb downstream 10.0kb downstream 12886 true scaffold_3: 3125478-3138363 Capsella rubella
Carub.0003s0915 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3125478-3135477 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040897 5273 Angiosperm View MSA
122377421 5261 Brassicaceae View MSA
123831169 5264 Brassicales-Malvales View MSA
124337828 5266 SBM View MSA
124240425 5268 Malvidae View MSA
124062087 5270 Rosid View MSA
123737037 5271 Pentapetalae View MSA
122787691 5272 Eudicot View MSA
121344792 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain