Gene : Carub.0003s0979 C. rubella v1.1
Defline:  (1 of 2) 3.1.3.64//3.1.3.95 - Phosphatidylinositol-3-phosphatase / Phosphatidyl-3-phosphate 3-phosphohydrolase // Phosphatidylinositol-3,5-bisphosphate 3-phosphatase / PtdIns-3,5-P(2) 3-Ptase Genomic Order:  979
Name:  ? Carub.0003s0979 Secondary Identifier:  ? PAC:39240493
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6367 Capsella rubella pathologic  
Crubella PWY-6368 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0979 0.5kb upstream 0.5kb upstream 6290 true scaffold_3: 3360728-3367017 Capsella rubella
Carub.0003s0979 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3366518-3367017 Capsella rubella
Carub.0003s0979 0.5kb downstream 0.5kb downstream 6290 true scaffold_3: 3360228-3366517 Capsella rubella
Carub.0003s0979 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3360228-3360727 Capsella rubella
Carub.0003s0979 1.0kb upstream 1.0kb upstream 6790 true scaffold_3: 3360728-3367517 Capsella rubella
Carub.0003s0979 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3366518-3367517 Capsella rubella
Carub.0003s0979 1.0kb downstream 1.0kb downstream 6790 true scaffold_3: 3359728-3366517 Capsella rubella
Carub.0003s0979 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3359728-3360727 Capsella rubella
Carub.0003s0979 2.0kb upstream 2.0kb upstream 7790 true scaffold_3: 3360728-3368517 Capsella rubella
Carub.0003s0979 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3366518-3368517 Capsella rubella
Carub.0003s0979 2.0kb downstream 2.0kb downstream 7790 true scaffold_3: 3358728-3366517 Capsella rubella
Carub.0003s0979 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3358728-3360727 Capsella rubella
Carub.0003s0979 5.0kb upstream 5.0kb upstream 10790 true scaffold_3: 3360728-3371517 Capsella rubella
Carub.0003s0979 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3366518-3371517 Capsella rubella
Carub.0003s0979 5.0kb downstream 5.0kb downstream 10790 true scaffold_3: 3355728-3366517 Capsella rubella
Carub.0003s0979 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3355728-3360727 Capsella rubella
Carub.0003s0979 10.0kb upstream 10.0kb upstream 15790 true scaffold_3: 3360728-3376517 Capsella rubella
Carub.0003s0979 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3366518-3376517 Capsella rubella
Carub.0003s0979 10.0kb downstream 10.0kb downstream 15790 true scaffold_3: 3350728-3366517 Capsella rubella
Carub.0003s0979 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3350728-3360727 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373913 5261 Brassicaceae View MSA
123833188 5264 Brassicales-Malvales View MSA
124321853 5266 SBM View MSA
124240271 5268 Malvidae View MSA
124069082 5270 Rosid View MSA
123744322 5271 Pentapetalae View MSA
122796754 5272 Eudicot View MSA
122047455 5273 Angiosperm View MSA
121350859 5274 Embryophyte View MSA
123381910 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain