Gene : Carub.0003s1044 C. rubella v1.1
Defline:  (1 of 2) K04646 - clathrin heavy chain (CLTC) Genomic Order:  1044
Name:  ? Carub.0003s1044 Secondary Identifier:  ? PAC:39239229
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1044 0.5kb upstream 0.5kb upstream 10101 true scaffold_3: 3559967-3570067 Capsella rubella
Carub.0003s1044 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3569568-3570067 Capsella rubella
Carub.0003s1044 0.5kb downstream 0.5kb downstream 10101 true scaffold_3: 3559467-3569567 Capsella rubella
Carub.0003s1044 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3559467-3559966 Capsella rubella
Carub.0003s1044 1.0kb upstream 1.0kb upstream 10601 true scaffold_3: 3559967-3570567 Capsella rubella
Carub.0003s1044 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3569568-3570567 Capsella rubella
Carub.0003s1044 1.0kb downstream 1.0kb downstream 10601 true scaffold_3: 3558967-3569567 Capsella rubella
Carub.0003s1044 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3558967-3559966 Capsella rubella
Carub.0003s1044 2.0kb upstream 2.0kb upstream 11601 true scaffold_3: 3559967-3571567 Capsella rubella
Carub.0003s1044 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3569568-3571567 Capsella rubella
Carub.0003s1044 2.0kb downstream 2.0kb downstream 11601 true scaffold_3: 3557967-3569567 Capsella rubella
Carub.0003s1044 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3557967-3559966 Capsella rubella
Carub.0003s1044 5.0kb upstream 5.0kb upstream 14601 true scaffold_3: 3559967-3574567 Capsella rubella
Carub.0003s1044 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3569568-3574567 Capsella rubella
Carub.0003s1044 5.0kb downstream 5.0kb downstream 14601 true scaffold_3: 3554967-3569567 Capsella rubella
Carub.0003s1044 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3554967-3559966 Capsella rubella
Carub.0003s1044 10.0kb upstream 10.0kb upstream 19601 true scaffold_3: 3559967-3579567 Capsella rubella
Carub.0003s1044 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3569568-3579567 Capsella rubella
Carub.0003s1044 10.0kb downstream 10.0kb downstream 19601 true scaffold_3: 3549967-3569567 Capsella rubella
Carub.0003s1044 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3549967-3559966 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027117 5273 Angiosperm View MSA
122363657 5261 Brassicaceae View MSA
123839262 5264 Brassicales-Malvales View MSA
124344477 5266 SBM View MSA
124236838 5268 Malvidae View MSA
124064401 5270 Rosid View MSA
123744166 5271 Pentapetalae View MSA
122788856 5272 Eudicot View MSA
121350817 5274 Embryophyte View MSA
123428843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain