Gene : Carub.0003s1045 C. rubella v1.1
Defline:  (1 of 1) PTHR34945//PTHR34945:SF1 - FAMILY NOT NAMED // 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN Genomic Order:  1045
Name:  ? Carub.0003s1045 Secondary Identifier:  ? PAC:39239650
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1045 0.5kb upstream 0.5kb upstream 2349 true scaffold_3: 3570327-3572675 Capsella rubella
Carub.0003s1045 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3572176-3572675 Capsella rubella
Carub.0003s1045 0.5kb downstream 0.5kb downstream 2349 true scaffold_3: 3569827-3572175 Capsella rubella
Carub.0003s1045 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3569827-3570326 Capsella rubella
Carub.0003s1045 1.0kb upstream 1.0kb upstream 2849 true scaffold_3: 3570327-3573175 Capsella rubella
Carub.0003s1045 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3572176-3573175 Capsella rubella
Carub.0003s1045 1.0kb downstream 1.0kb downstream 2849 true scaffold_3: 3569327-3572175 Capsella rubella
Carub.0003s1045 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3569327-3570326 Capsella rubella
Carub.0003s1045 2.0kb upstream 2.0kb upstream 3849 true scaffold_3: 3570327-3574175 Capsella rubella
Carub.0003s1045 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3572176-3574175 Capsella rubella
Carub.0003s1045 2.0kb downstream 2.0kb downstream 3849 true scaffold_3: 3568327-3572175 Capsella rubella
Carub.0003s1045 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3568327-3570326 Capsella rubella
Carub.0003s1045 5.0kb upstream 5.0kb upstream 6849 true scaffold_3: 3570327-3577175 Capsella rubella
Carub.0003s1045 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3572176-3577175 Capsella rubella
Carub.0003s1045 5.0kb downstream 5.0kb downstream 6849 true scaffold_3: 3565327-3572175 Capsella rubella
Carub.0003s1045 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3565327-3570326 Capsella rubella
Carub.0003s1045 10.0kb upstream 10.0kb upstream 11849 true scaffold_3: 3570327-3582175 Capsella rubella
Carub.0003s1045 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3572176-3582175 Capsella rubella
Carub.0003s1045 10.0kb downstream 10.0kb downstream 11849 true scaffold_3: 3560327-3572175 Capsella rubella
Carub.0003s1045 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3560327-3570326 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372750 5261 Brassicaceae View MSA
123830106 5264 Brassicales-Malvales View MSA
124340139 5266 SBM View MSA
124238448 5268 Malvidae View MSA
124063750 5270 Rosid View MSA
123740513 5271 Pentapetalae View MSA
122786600 5272 Eudicot View MSA
122046716 5273 Angiosperm View MSA
121310645 5274 Embryophyte View MSA
123348077 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain