Gene : Carub.0003s1126 C. rubella v1.1
Defline:  (1 of 2) K02989 - small subunit ribosomal protein S5e (RP-S5e, RPS5) Genomic Order:  1126
Name:  ? Carub.0003s1126 Secondary Identifier:  ? PAC:39239719
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1126 0.5kb upstream 0.5kb upstream 2075 true scaffold_3: 3873404-3875478 Capsella rubella
Carub.0003s1126 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3874979-3875478 Capsella rubella
Carub.0003s1126 0.5kb downstream 0.5kb downstream 2075 true scaffold_3: 3872904-3874978 Capsella rubella
Carub.0003s1126 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3872904-3873403 Capsella rubella
Carub.0003s1126 1.0kb upstream 1.0kb upstream 2575 true scaffold_3: 3873404-3875978 Capsella rubella
Carub.0003s1126 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3874979-3875978 Capsella rubella
Carub.0003s1126 1.0kb downstream 1.0kb downstream 2575 true scaffold_3: 3872404-3874978 Capsella rubella
Carub.0003s1126 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3872404-3873403 Capsella rubella
Carub.0003s1126 2.0kb upstream 2.0kb upstream 3575 true scaffold_3: 3873404-3876978 Capsella rubella
Carub.0003s1126 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3874979-3876978 Capsella rubella
Carub.0003s1126 2.0kb downstream 2.0kb downstream 3575 true scaffold_3: 3871404-3874978 Capsella rubella
Carub.0003s1126 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3871404-3873403 Capsella rubella
Carub.0003s1126 5.0kb upstream 5.0kb upstream 6575 true scaffold_3: 3873404-3879978 Capsella rubella
Carub.0003s1126 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3874979-3879978 Capsella rubella
Carub.0003s1126 5.0kb downstream 5.0kb downstream 6575 true scaffold_3: 3868404-3874978 Capsella rubella
Carub.0003s1126 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3868404-3873403 Capsella rubella
Carub.0003s1126 10.0kb upstream 10.0kb upstream 11575 true scaffold_3: 3873404-3884978 Capsella rubella
Carub.0003s1126 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3874979-3884978 Capsella rubella
Carub.0003s1126 10.0kb downstream 10.0kb downstream 11575 true scaffold_3: 3863404-3874978 Capsella rubella
Carub.0003s1126 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3863404-3873403 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381573 5261 Brassicaceae View MSA
123840434 5264 Brassicales-Malvales View MSA
124338311 5266 SBM View MSA
124246877 5268 Malvidae View MSA
124064641 5270 Rosid View MSA
123749742 5271 Pentapetalae View MSA
122785829 5272 Eudicot View MSA
122048966 5273 Angiosperm View MSA
121345669 5274 Embryophyte View MSA
123423957 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain