Gene : Carub.0003s1146 C. rubella v1.1

Defline:  (1 of 1) K10256 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD2) Genomic Order:  1146
Name:  ? Carub.0003s1146 Secondary Identifier:  ? PAC:39240166

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1146 0.5kb upstream 0.5kb upstream 3402 true scaffold_3: 3951882-3955283 Capsella rubella
Carub.0003s1146 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3954784-3955283 Capsella rubella
Carub.0003s1146 0.5kb downstream 0.5kb downstream 3402 true scaffold_3: 3951382-3954783 Capsella rubella
Carub.0003s1146 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3951382-3951881 Capsella rubella
Carub.0003s1146 1.0kb upstream 1.0kb upstream 3902 true scaffold_3: 3951882-3955783 Capsella rubella
Carub.0003s1146 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3954784-3955783 Capsella rubella
Carub.0003s1146 1.0kb downstream 1.0kb downstream 3902 true scaffold_3: 3950882-3954783 Capsella rubella
Carub.0003s1146 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3950882-3951881 Capsella rubella
Carub.0003s1146 2.0kb upstream 2.0kb upstream 4902 true scaffold_3: 3951882-3956783 Capsella rubella
Carub.0003s1146 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3954784-3956783 Capsella rubella
Carub.0003s1146 2.0kb downstream 2.0kb downstream 4902 true scaffold_3: 3949882-3954783 Capsella rubella
Carub.0003s1146 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3949882-3951881 Capsella rubella
Carub.0003s1146 5.0kb upstream 5.0kb upstream 7902 true scaffold_3: 3951882-3959783 Capsella rubella
Carub.0003s1146 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3954784-3959783 Capsella rubella
Carub.0003s1146 5.0kb downstream 5.0kb downstream 7902 true scaffold_3: 3946882-3954783 Capsella rubella
Carub.0003s1146 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3946882-3951881 Capsella rubella
Carub.0003s1146 10.0kb upstream 10.0kb upstream 12902 true scaffold_3: 3951882-3964783 Capsella rubella
Carub.0003s1146 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3954784-3964783 Capsella rubella
Carub.0003s1146 10.0kb downstream 10.0kb downstream 12902 true scaffold_3: 3941882-3954783 Capsella rubella
Carub.0003s1146 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3941882-3951881 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041215 5273 Angiosperm View MSA
122362929 5261 Brassicaceae View MSA
123833329 5264 Brassicales-Malvales View MSA
124337061 5266 SBM View MSA
124236888 5268 Malvidae View MSA
124074119 5270 Rosid View MSA
123747966 5271 Pentapetalae View MSA
122789327 5272 Eudicot View MSA
121347269 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain