Gene : Carub.0003s1153 C. rubella v1.1
Defline:  (1 of 1) PTHR24073//PTHR24073:SF578 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA4D Genomic Order:  1153
Name:  ? Carub.0003s1153 Secondary Identifier:  ? PAC:39241932
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1153 0.5kb upstream 0.5kb upstream 2113 true scaffold_3: 3973025-3975137 Capsella rubella
Carub.0003s1153 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3974638-3975137 Capsella rubella
Carub.0003s1153 0.5kb downstream 0.5kb downstream 2113 true scaffold_3: 3972525-3974637 Capsella rubella
Carub.0003s1153 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3972525-3973024 Capsella rubella
Carub.0003s1153 1.0kb upstream 1.0kb upstream 2613 true scaffold_3: 3973025-3975637 Capsella rubella
Carub.0003s1153 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3974638-3975637 Capsella rubella
Carub.0003s1153 1.0kb downstream 1.0kb downstream 2613 true scaffold_3: 3972025-3974637 Capsella rubella
Carub.0003s1153 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3972025-3973024 Capsella rubella
Carub.0003s1153 2.0kb upstream 2.0kb upstream 3613 true scaffold_3: 3973025-3976637 Capsella rubella
Carub.0003s1153 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3974638-3976637 Capsella rubella
Carub.0003s1153 2.0kb downstream 2.0kb downstream 3613 true scaffold_3: 3971025-3974637 Capsella rubella
Carub.0003s1153 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3971025-3973024 Capsella rubella
Carub.0003s1153 5.0kb upstream 5.0kb upstream 6613 true scaffold_3: 3973025-3979637 Capsella rubella
Carub.0003s1153 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3974638-3979637 Capsella rubella
Carub.0003s1153 5.0kb downstream 5.0kb downstream 6613 true scaffold_3: 3968025-3974637 Capsella rubella
Carub.0003s1153 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3968025-3973024 Capsella rubella
Carub.0003s1153 10.0kb upstream 10.0kb upstream 11613 true scaffold_3: 3973025-3984637 Capsella rubella
Carub.0003s1153 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3974638-3984637 Capsella rubella
Carub.0003s1153 10.0kb downstream 10.0kb downstream 11613 true scaffold_3: 3963025-3974637 Capsella rubella
Carub.0003s1153 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3963025-3973024 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369656 5261 Brassicaceae View MSA
123829186 5264 Brassicales-Malvales View MSA
124350170 5266 SBM View MSA
124253200 5268 Malvidae View MSA
124065082 5270 Rosid View MSA
123746606 5271 Pentapetalae View MSA
122786113 5272 Eudicot View MSA
122041554 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain