Gene : Carub.0003s1168 C. rubella v1.1
Defline:  (1 of 2) PTHR33334//PTHR33334:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MQC3 Genomic Order:  1168
Name:  ? Carub.0003s1168 Secondary Identifier:  ? PAC:39240723
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1168 0.5kb upstream 0.5kb upstream 2401 true scaffold_3: 4013240-4015640 Capsella rubella
Carub.0003s1168 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4013240-4013739 Capsella rubella
Carub.0003s1168 0.5kb downstream 0.5kb downstream 2401 true scaffold_3: 4013740-4016140 Capsella rubella
Carub.0003s1168 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4015641-4016140 Capsella rubella
Carub.0003s1168 1.0kb upstream 1.0kb upstream 2901 true scaffold_3: 4012740-4015640 Capsella rubella
Carub.0003s1168 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4012740-4013739 Capsella rubella
Carub.0003s1168 1.0kb downstream 1.0kb downstream 2901 true scaffold_3: 4013740-4016640 Capsella rubella
Carub.0003s1168 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4015641-4016640 Capsella rubella
Carub.0003s1168 2.0kb upstream 2.0kb upstream 3901 true scaffold_3: 4011740-4015640 Capsella rubella
Carub.0003s1168 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4011740-4013739 Capsella rubella
Carub.0003s1168 2.0kb downstream 2.0kb downstream 3901 true scaffold_3: 4013740-4017640 Capsella rubella
Carub.0003s1168 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4015641-4017640 Capsella rubella
Carub.0003s1168 5.0kb upstream 5.0kb upstream 6901 true scaffold_3: 4008740-4015640 Capsella rubella
Carub.0003s1168 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4008740-4013739 Capsella rubella
Carub.0003s1168 5.0kb downstream 5.0kb downstream 6901 true scaffold_3: 4013740-4020640 Capsella rubella
Carub.0003s1168 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4015641-4020640 Capsella rubella
Carub.0003s1168 10.0kb upstream 10.0kb upstream 11901 true scaffold_3: 4003740-4015640 Capsella rubella
Carub.0003s1168 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4003740-4013739 Capsella rubella
Carub.0003s1168 10.0kb downstream 10.0kb downstream 11901 true scaffold_3: 4013740-4025640 Capsella rubella
Carub.0003s1168 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4015641-4025640 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367859 5261 Brassicaceae View MSA
123840813 5264 Brassicales-Malvales View MSA
124322787 5266 SBM View MSA
124248764 5268 Malvidae View MSA
124070153 5270 Rosid View MSA
123737898 5271 Pentapetalae View MSA
122796234 5272 Eudicot View MSA
122050625 5273 Angiosperm View MSA
121312034 5274 Embryophyte View MSA
123349247 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain