Gene : Carub.0003s0733 C. rubella v1.1

Defline:  (1 of 1) K12589 - exosome complex component RRP42 (RRP42, EXOSC7) Genomic Order:  733
Name:  ? Carub.0003s0733 Secondary Identifier:  ? PAC:39240240

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0733 0.5kb upstream 0.5kb upstream 2740 true scaffold_3: 2516169-2518908 Capsella rubella
Carub.0003s0733 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2516169-2516668 Capsella rubella
Carub.0003s0733 0.5kb downstream 0.5kb downstream 2740 true scaffold_3: 2516669-2519408 Capsella rubella
Carub.0003s0733 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2518909-2519408 Capsella rubella
Carub.0003s0733 1.0kb upstream 1.0kb upstream 3240 true scaffold_3: 2515669-2518908 Capsella rubella
Carub.0003s0733 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2515669-2516668 Capsella rubella
Carub.0003s0733 1.0kb downstream 1.0kb downstream 3240 true scaffold_3: 2516669-2519908 Capsella rubella
Carub.0003s0733 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2518909-2519908 Capsella rubella
Carub.0003s0733 2.0kb upstream 2.0kb upstream 4240 true scaffold_3: 2514669-2518908 Capsella rubella
Carub.0003s0733 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2514669-2516668 Capsella rubella
Carub.0003s0733 2.0kb downstream 2.0kb downstream 4240 true scaffold_3: 2516669-2520908 Capsella rubella
Carub.0003s0733 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2518909-2520908 Capsella rubella
Carub.0003s0733 5.0kb upstream 5.0kb upstream 7240 true scaffold_3: 2511669-2518908 Capsella rubella
Carub.0003s0733 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2511669-2516668 Capsella rubella
Carub.0003s0733 5.0kb downstream 5.0kb downstream 7240 true scaffold_3: 2516669-2523908 Capsella rubella
Carub.0003s0733 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2518909-2523908 Capsella rubella
Carub.0003s0733 10.0kb upstream 10.0kb upstream 12240 true scaffold_3: 2506669-2518908 Capsella rubella
Carub.0003s0733 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2506669-2516668 Capsella rubella
Carub.0003s0733 10.0kb downstream 10.0kb downstream 12240 true scaffold_3: 2516669-2528908 Capsella rubella
Carub.0003s0733 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2518909-2528908 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372943 5261 Brassicaceae View MSA
123827568 5264 Brassicales-Malvales View MSA
124338905 5266 SBM View MSA
124242545 5268 Malvidae View MSA
124064835 5270 Rosid View MSA
123739797 5271 Pentapetalae View MSA
122793133 5272 Eudicot View MSA
122044791 5273 Angiosperm View MSA
121345379 5274 Embryophyte View MSA
123428075 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain