Gene : Carub.0003s0754 C. rubella v1.1
Defline:  (1 of 1) PTHR23086:SF29 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 6 Genomic Order:  754
Name:  ? Carub.0003s0754 Secondary Identifier:  ? PAC:39242752
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6351 Capsella rubella pathologic  
Crubella PWY-6352 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0754 0.5kb upstream 0.5kb upstream 3681 true scaffold_3: 2579494-2583174 Capsella rubella
Carub.0003s0754 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2579494-2579993 Capsella rubella
Carub.0003s0754 0.5kb downstream 0.5kb downstream 3681 true scaffold_3: 2579994-2583674 Capsella rubella
Carub.0003s0754 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2583175-2583674 Capsella rubella
Carub.0003s0754 1.0kb upstream 1.0kb upstream 4181 true scaffold_3: 2578994-2583174 Capsella rubella
Carub.0003s0754 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2578994-2579993 Capsella rubella
Carub.0003s0754 1.0kb downstream 1.0kb downstream 4181 true scaffold_3: 2579994-2584174 Capsella rubella
Carub.0003s0754 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2583175-2584174 Capsella rubella
Carub.0003s0754 2.0kb upstream 2.0kb upstream 5181 true scaffold_3: 2577994-2583174 Capsella rubella
Carub.0003s0754 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2577994-2579993 Capsella rubella
Carub.0003s0754 2.0kb downstream 2.0kb downstream 5181 true scaffold_3: 2579994-2585174 Capsella rubella
Carub.0003s0754 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2583175-2585174 Capsella rubella
Carub.0003s0754 5.0kb upstream 5.0kb upstream 8181 true scaffold_3: 2574994-2583174 Capsella rubella
Carub.0003s0754 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2574994-2579993 Capsella rubella
Carub.0003s0754 5.0kb downstream 5.0kb downstream 8181 true scaffold_3: 2579994-2588174 Capsella rubella
Carub.0003s0754 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2583175-2588174 Capsella rubella
Carub.0003s0754 10.0kb upstream 10.0kb upstream 13181 true scaffold_3: 2569994-2583174 Capsella rubella
Carub.0003s0754 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2569994-2579993 Capsella rubella
Carub.0003s0754 10.0kb downstream 10.0kb downstream 13181 true scaffold_3: 2579994-2593174 Capsella rubella
Carub.0003s0754 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2583175-2593174 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362710 5261 Brassicaceae View MSA
123835187 5264 Brassicales-Malvales View MSA
124337249 5266 SBM View MSA
124238892 5268 Malvidae View MSA
124073684 5270 Rosid View MSA
123747330 5271 Pentapetalae View MSA
122788169 5272 Eudicot View MSA
122047903 5273 Angiosperm View MSA
121310813 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain