Gene : Carub.0003s0757 C. rubella v1.1

Defline:  (1 of 2) PTHR11802//PTHR11802:SF71 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE // SERINE CARBOXYPEPTIDASE-LIKE 26-RELATED Genomic Order:  757
Name:  ? Carub.0003s0757 Secondary Identifier:  ? PAC:39239861

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0757 0.5kb upstream 0.5kb upstream 2786 true scaffold_3: 2599126-2601911 Capsella rubella
Carub.0003s0757 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2599126-2599625 Capsella rubella
Carub.0003s0757 0.5kb downstream 0.5kb downstream 2786 true scaffold_3: 2599626-2602411 Capsella rubella
Carub.0003s0757 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2601912-2602411 Capsella rubella
Carub.0003s0757 1.0kb upstream 1.0kb upstream 3286 true scaffold_3: 2598626-2601911 Capsella rubella
Carub.0003s0757 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2598626-2599625 Capsella rubella
Carub.0003s0757 1.0kb downstream 1.0kb downstream 3286 true scaffold_3: 2599626-2602911 Capsella rubella
Carub.0003s0757 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2601912-2602911 Capsella rubella
Carub.0003s0757 2.0kb upstream 2.0kb upstream 4286 true scaffold_3: 2597626-2601911 Capsella rubella
Carub.0003s0757 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2597626-2599625 Capsella rubella
Carub.0003s0757 2.0kb downstream 2.0kb downstream 4286 true scaffold_3: 2599626-2603911 Capsella rubella
Carub.0003s0757 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2601912-2603911 Capsella rubella
Carub.0003s0757 5.0kb upstream 5.0kb upstream 7286 true scaffold_3: 2594626-2601911 Capsella rubella
Carub.0003s0757 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2594626-2599625 Capsella rubella
Carub.0003s0757 5.0kb downstream 5.0kb downstream 7286 true scaffold_3: 2599626-2606911 Capsella rubella
Carub.0003s0757 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2601912-2606911 Capsella rubella
Carub.0003s0757 10.0kb upstream 10.0kb upstream 12286 true scaffold_3: 2589626-2601911 Capsella rubella
Carub.0003s0757 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2589626-2599625 Capsella rubella
Carub.0003s0757 10.0kb downstream 10.0kb downstream 12286 true scaffold_3: 2599626-2611911 Capsella rubella
Carub.0003s0757 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2601912-2611911 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364311 5261 Brassicaceae View MSA
123829488 5264 Brassicales-Malvales View MSA
124336704 5266 SBM View MSA
124249399 5268 Malvidae View MSA
124064837 5270 Rosid View MSA
123739896 5271 Pentapetalae View MSA
122788632 5272 Eudicot View MSA
122046217 5273 Angiosperm View MSA
121349139 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain