Gene : Carub.0003s0816 C. rubella v1.1
Defline:  (1 of 2) PTHR11145 - TUMOR NECROSIS FACTOR-RELATED Genomic Order:  816
Name:  ? Carub.0003s0816 Secondary Identifier:  ? PAC:39240704
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0816 0.5kb upstream 0.5kb upstream 2527 true scaffold_3: 2805685-2808211 Capsella rubella
Carub.0003s0816 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2805685-2806184 Capsella rubella
Carub.0003s0816 0.5kb downstream 0.5kb downstream 2527 true scaffold_3: 2806185-2808711 Capsella rubella
Carub.0003s0816 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2808212-2808711 Capsella rubella
Carub.0003s0816 1.0kb upstream 1.0kb upstream 3027 true scaffold_3: 2805185-2808211 Capsella rubella
Carub.0003s0816 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2805185-2806184 Capsella rubella
Carub.0003s0816 1.0kb downstream 1.0kb downstream 3027 true scaffold_3: 2806185-2809211 Capsella rubella
Carub.0003s0816 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2808212-2809211 Capsella rubella
Carub.0003s0816 2.0kb upstream 2.0kb upstream 4027 true scaffold_3: 2804185-2808211 Capsella rubella
Carub.0003s0816 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2804185-2806184 Capsella rubella
Carub.0003s0816 2.0kb downstream 2.0kb downstream 4027 true scaffold_3: 2806185-2810211 Capsella rubella
Carub.0003s0816 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2808212-2810211 Capsella rubella
Carub.0003s0816 5.0kb upstream 5.0kb upstream 7027 true scaffold_3: 2801185-2808211 Capsella rubella
Carub.0003s0816 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2801185-2806184 Capsella rubella
Carub.0003s0816 5.0kb downstream 5.0kb downstream 7027 true scaffold_3: 2806185-2813211 Capsella rubella
Carub.0003s0816 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2808212-2813211 Capsella rubella
Carub.0003s0816 10.0kb upstream 10.0kb upstream 12027 true scaffold_3: 2796185-2808211 Capsella rubella
Carub.0003s0816 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2796185-2806184 Capsella rubella
Carub.0003s0816 10.0kb downstream 10.0kb downstream 12027 true scaffold_3: 2806185-2818211 Capsella rubella
Carub.0003s0816 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2808212-2818211 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363702 5261 Brassicaceae View MSA
123834596 5264 Brassicales-Malvales View MSA
124339731 5266 SBM View MSA
124241759 5268 Malvidae View MSA
124065246 5270 Rosid View MSA
123739700 5271 Pentapetalae View MSA
122793566 5272 Eudicot View MSA
122045372 5273 Angiosperm View MSA
121348328 5274 Embryophyte View MSA
123380822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain