Gene : Carub.0003s0837 C. rubella v1.1
Defline:  (1 of 27) K01188 - beta-glucosidase (E3.2.1.21) Genomic Order:  837
Name:  ? Carub.0003s0837 Secondary Identifier:  ? PAC:39239462
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5176 Capsella rubella pathologic  
Crubella PWY-7089 Capsella rubella pathologic  
Crubella PWY-7091 Capsella rubella pathologic  
Crubella PWY-7092 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0837 0.5kb upstream 0.5kb upstream 3380 true scaffold_3: 2878884-2882263 Capsella rubella
Carub.0003s0837 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2881764-2882263 Capsella rubella
Carub.0003s0837 0.5kb downstream 0.5kb downstream 3380 true scaffold_3: 2878384-2881763 Capsella rubella
Carub.0003s0837 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2878384-2878883 Capsella rubella
Carub.0003s0837 1.0kb upstream 1.0kb upstream 3880 true scaffold_3: 2878884-2882763 Capsella rubella
Carub.0003s0837 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2881764-2882763 Capsella rubella
Carub.0003s0837 1.0kb downstream 1.0kb downstream 3880 true scaffold_3: 2877884-2881763 Capsella rubella
Carub.0003s0837 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2877884-2878883 Capsella rubella
Carub.0003s0837 2.0kb upstream 2.0kb upstream 4880 true scaffold_3: 2878884-2883763 Capsella rubella
Carub.0003s0837 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2881764-2883763 Capsella rubella
Carub.0003s0837 2.0kb downstream 2.0kb downstream 4880 true scaffold_3: 2876884-2881763 Capsella rubella
Carub.0003s0837 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2876884-2878883 Capsella rubella
Carub.0003s0837 5.0kb upstream 5.0kb upstream 7880 true scaffold_3: 2878884-2886763 Capsella rubella
Carub.0003s0837 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2881764-2886763 Capsella rubella
Carub.0003s0837 5.0kb downstream 5.0kb downstream 7880 true scaffold_3: 2873884-2881763 Capsella rubella
Carub.0003s0837 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2873884-2878883 Capsella rubella
Carub.0003s0837 10.0kb upstream 10.0kb upstream 12880 true scaffold_3: 2878884-2891763 Capsella rubella
Carub.0003s0837 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2881764-2891763 Capsella rubella
Carub.0003s0837 10.0kb downstream 10.0kb downstream 12880 true scaffold_3: 2868884-2881763 Capsella rubella
Carub.0003s0837 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2868884-2878883 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121784895 5273 Angiosperm View MSA
122377592 5261 Brassicaceae View MSA
123801574 5264 Brassicales-Malvales View MSA
124298860 5266 SBM View MSA
124255720 5268 Malvidae View MSA
123953271 5270 Rosid View MSA
123757098 5271 Pentapetalae View MSA
122778172 5272 Eudicot View MSA
121056296 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain