Gene : Carub.0003s0869 C. rubella v1.1
Defline:  (1 of 7) PTHR10334:SF204 - ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN-RELATED Genomic Order:  869
Name:  ? Carub.0003s0869 Secondary Identifier:  ? PAC:39239200
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0869 0.5kb upstream 0.5kb upstream 1258 true scaffold_3: 2974416-2975673 Capsella rubella
Carub.0003s0869 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2974416-2974915 Capsella rubella
Carub.0003s0869 0.5kb downstream 0.5kb downstream 1258 true scaffold_3: 2974916-2976173 Capsella rubella
Carub.0003s0869 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2975674-2976173 Capsella rubella
Carub.0003s0869 1.0kb upstream 1.0kb upstream 1758 true scaffold_3: 2973916-2975673 Capsella rubella
Carub.0003s0869 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2973916-2974915 Capsella rubella
Carub.0003s0869 1.0kb downstream 1.0kb downstream 1758 true scaffold_3: 2974916-2976673 Capsella rubella
Carub.0003s0869 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2975674-2976673 Capsella rubella
Carub.0003s0869 2.0kb upstream 2.0kb upstream 2758 true scaffold_3: 2972916-2975673 Capsella rubella
Carub.0003s0869 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2972916-2974915 Capsella rubella
Carub.0003s0869 2.0kb downstream 2.0kb downstream 2758 true scaffold_3: 2974916-2977673 Capsella rubella
Carub.0003s0869 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2975674-2977673 Capsella rubella
Carub.0003s0869 5.0kb upstream 5.0kb upstream 5758 true scaffold_3: 2969916-2975673 Capsella rubella
Carub.0003s0869 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2969916-2974915 Capsella rubella
Carub.0003s0869 5.0kb downstream 5.0kb downstream 5758 true scaffold_3: 2974916-2980673 Capsella rubella
Carub.0003s0869 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2975674-2980673 Capsella rubella
Carub.0003s0869 10.0kb upstream 10.0kb upstream 10758 true scaffold_3: 2964916-2975673 Capsella rubella
Carub.0003s0869 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2964916-2974915 Capsella rubella
Carub.0003s0869 10.0kb downstream 10.0kb downstream 10758 true scaffold_3: 2974916-2985673 Capsella rubella
Carub.0003s0869 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2975674-2985673 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369039 5261 Brassicaceae View MSA
123841077 5264 Brassicales-Malvales View MSA
124322836 5266 SBM View MSA
124245039 5268 Malvidae View MSA
124071232 5270 Rosid View MSA
123751751 5271 Pentapetalae View MSA
122797168 5272 Eudicot View MSA
122051477 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121350274 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain