Gene : Carub.0003s0678 C. rubella v1.1
Defline:  (1 of 4) PTHR31413//PTHR31413:SF4 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP1-RELATED Genomic Order:  678
Name:  ? Carub.0003s0678 Secondary Identifier:  ? PAC:39241851
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0678 0.5kb upstream 0.5kb upstream 1735 true scaffold_3: 2334006-2335740 Capsella rubella
Carub.0003s0678 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2335241-2335740 Capsella rubella
Carub.0003s0678 0.5kb downstream 0.5kb downstream 1735 true scaffold_3: 2333506-2335240 Capsella rubella
Carub.0003s0678 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2333506-2334005 Capsella rubella
Carub.0003s0678 1.0kb upstream 1.0kb upstream 2235 true scaffold_3: 2334006-2336240 Capsella rubella
Carub.0003s0678 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2335241-2336240 Capsella rubella
Carub.0003s0678 1.0kb downstream 1.0kb downstream 2235 true scaffold_3: 2333006-2335240 Capsella rubella
Carub.0003s0678 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2333006-2334005 Capsella rubella
Carub.0003s0678 2.0kb upstream 2.0kb upstream 3235 true scaffold_3: 2334006-2337240 Capsella rubella
Carub.0003s0678 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2335241-2337240 Capsella rubella
Carub.0003s0678 2.0kb downstream 2.0kb downstream 3235 true scaffold_3: 2332006-2335240 Capsella rubella
Carub.0003s0678 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2332006-2334005 Capsella rubella
Carub.0003s0678 5.0kb upstream 5.0kb upstream 6235 true scaffold_3: 2334006-2340240 Capsella rubella
Carub.0003s0678 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2335241-2340240 Capsella rubella
Carub.0003s0678 5.0kb downstream 5.0kb downstream 6235 true scaffold_3: 2329006-2335240 Capsella rubella
Carub.0003s0678 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2329006-2334005 Capsella rubella
Carub.0003s0678 10.0kb upstream 10.0kb upstream 11235 true scaffold_3: 2334006-2345240 Capsella rubella
Carub.0003s0678 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2335241-2345240 Capsella rubella
Carub.0003s0678 10.0kb downstream 10.0kb downstream 11235 true scaffold_3: 2324006-2335240 Capsella rubella
Carub.0003s0678 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2324006-2334005 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366621 5261 Brassicaceae View MSA
123799214 5264 Brassicales-Malvales View MSA
124296760 5266 SBM View MSA
124251961 5268 Malvidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain