Gene : Carub.0003s0691 C. rubella v1.1
Defline:  (1 of 1) PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 Genomic Order:  691
Name:  ? Carub.0003s0691 Secondary Identifier:  ? PAC:39242226
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0691 0.5kb upstream 0.5kb upstream 2681 true scaffold_3: 2386732-2389412 Capsella rubella
Carub.0003s0691 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2386732-2387231 Capsella rubella
Carub.0003s0691 0.5kb downstream 0.5kb downstream 2681 true scaffold_3: 2387232-2389912 Capsella rubella
Carub.0003s0691 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2389413-2389912 Capsella rubella
Carub.0003s0691 1.0kb upstream 1.0kb upstream 3181 true scaffold_3: 2386232-2389412 Capsella rubella
Carub.0003s0691 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2386232-2387231 Capsella rubella
Carub.0003s0691 1.0kb downstream 1.0kb downstream 3181 true scaffold_3: 2387232-2390412 Capsella rubella
Carub.0003s0691 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2389413-2390412 Capsella rubella
Carub.0003s0691 2.0kb upstream 2.0kb upstream 4181 true scaffold_3: 2385232-2389412 Capsella rubella
Carub.0003s0691 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2385232-2387231 Capsella rubella
Carub.0003s0691 2.0kb downstream 2.0kb downstream 4181 true scaffold_3: 2387232-2391412 Capsella rubella
Carub.0003s0691 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2389413-2391412 Capsella rubella
Carub.0003s0691 5.0kb upstream 5.0kb upstream 7181 true scaffold_3: 2382232-2389412 Capsella rubella
Carub.0003s0691 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2382232-2387231 Capsella rubella
Carub.0003s0691 5.0kb downstream 5.0kb downstream 7181 true scaffold_3: 2387232-2394412 Capsella rubella
Carub.0003s0691 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2389413-2394412 Capsella rubella
Carub.0003s0691 10.0kb upstream 10.0kb upstream 12181 true scaffold_3: 2377232-2389412 Capsella rubella
Carub.0003s0691 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2377232-2387231 Capsella rubella
Carub.0003s0691 10.0kb downstream 10.0kb downstream 12181 true scaffold_3: 2387232-2399412 Capsella rubella
Carub.0003s0691 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2389413-2399412 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029179 5273 Angiosperm View MSA
122369744 5261 Brassicaceae View MSA
123835906 5264 Brassicales-Malvales View MSA
124342751 5266 SBM View MSA
124251189 5268 Malvidae View MSA
124071680 5270 Rosid View MSA
123745896 5271 Pentapetalae View MSA
122785914 5272 Eudicot View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain