Gene : Carub.0003s0720 C. rubella v1.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF90 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  720
Name:  ? Carub.0003s0720 Secondary Identifier:  ? PAC:39241229
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5980 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0720 0.5kb upstream 0.5kb upstream 2154 true scaffold_3: 2473023-2475176 Capsella rubella
Carub.0003s0720 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2474677-2475176 Capsella rubella
Carub.0003s0720 0.5kb downstream 0.5kb downstream 2154 true scaffold_3: 2472523-2474676 Capsella rubella
Carub.0003s0720 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2472523-2473022 Capsella rubella
Carub.0003s0720 1.0kb upstream 1.0kb upstream 2654 true scaffold_3: 2473023-2475676 Capsella rubella
Carub.0003s0720 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2474677-2475676 Capsella rubella
Carub.0003s0720 1.0kb downstream 1.0kb downstream 2654 true scaffold_3: 2472023-2474676 Capsella rubella
Carub.0003s0720 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2472023-2473022 Capsella rubella
Carub.0003s0720 2.0kb upstream 2.0kb upstream 3654 true scaffold_3: 2473023-2476676 Capsella rubella
Carub.0003s0720 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2474677-2476676 Capsella rubella
Carub.0003s0720 2.0kb downstream 2.0kb downstream 3654 true scaffold_3: 2471023-2474676 Capsella rubella
Carub.0003s0720 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2471023-2473022 Capsella rubella
Carub.0003s0720 5.0kb upstream 5.0kb upstream 6654 true scaffold_3: 2473023-2479676 Capsella rubella
Carub.0003s0720 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2474677-2479676 Capsella rubella
Carub.0003s0720 5.0kb downstream 5.0kb downstream 6654 true scaffold_3: 2468023-2474676 Capsella rubella
Carub.0003s0720 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2468023-2473022 Capsella rubella
Carub.0003s0720 10.0kb upstream 10.0kb upstream 11654 true scaffold_3: 2473023-2484676 Capsella rubella
Carub.0003s0720 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2474677-2484676 Capsella rubella
Carub.0003s0720 10.0kb downstream 10.0kb downstream 11654 true scaffold_3: 2463023-2474676 Capsella rubella
Carub.0003s0720 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2463023-2473022 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365835 5261 Brassicaceae View MSA
123835010 5264 Brassicales-Malvales View MSA
124321992 5266 SBM View MSA
124246530 5268 Malvidae View MSA
124070625 5270 Rosid View MSA
123746709 5271 Pentapetalae View MSA
122795318 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain