Gene : Carub.0003s0948 C. rubella v1.1
Defline:  (1 of 4) PTHR10183 - CALPAIN Genomic Order:  948
Name:  ? Carub.0003s0948 Secondary Identifier:  ? PAC:39242513
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0948 0.5kb upstream 0.5kb upstream 2292 true scaffold_3: 3248424-3250715 Capsella rubella
Carub.0003s0948 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3248424-3248923 Capsella rubella
Carub.0003s0948 0.5kb downstream 0.5kb downstream 2292 true scaffold_3: 3248924-3251215 Capsella rubella
Carub.0003s0948 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3250716-3251215 Capsella rubella
Carub.0003s0948 1.0kb upstream 1.0kb upstream 2792 true scaffold_3: 3247924-3250715 Capsella rubella
Carub.0003s0948 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3247924-3248923 Capsella rubella
Carub.0003s0948 1.0kb downstream 1.0kb downstream 2792 true scaffold_3: 3248924-3251715 Capsella rubella
Carub.0003s0948 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3250716-3251715 Capsella rubella
Carub.0003s0948 2.0kb upstream 2.0kb upstream 3792 true scaffold_3: 3246924-3250715 Capsella rubella
Carub.0003s0948 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3246924-3248923 Capsella rubella
Carub.0003s0948 2.0kb downstream 2.0kb downstream 3792 true scaffold_3: 3248924-3252715 Capsella rubella
Carub.0003s0948 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3250716-3252715 Capsella rubella
Carub.0003s0948 5.0kb upstream 5.0kb upstream 6792 true scaffold_3: 3243924-3250715 Capsella rubella
Carub.0003s0948 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3243924-3248923 Capsella rubella
Carub.0003s0948 5.0kb downstream 5.0kb downstream 6792 true scaffold_3: 3248924-3255715 Capsella rubella
Carub.0003s0948 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3250716-3255715 Capsella rubella
Carub.0003s0948 10.0kb upstream 10.0kb upstream 11792 true scaffold_3: 3238924-3250715 Capsella rubella
Carub.0003s0948 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3238924-3248923 Capsella rubella
Carub.0003s0948 10.0kb downstream 10.0kb downstream 11792 true scaffold_3: 3248924-3260715 Capsella rubella
Carub.0003s0948 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3250716-3260715 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369343 5261 Brassicaceae View MSA
123836587 5264 Brassicales-Malvales View MSA
124338746 5266 SBM View MSA
124239848 5268 Malvidae View MSA
124064338 5270 Rosid View MSA
123744145 5271 Pentapetalae View MSA
122790435 5272 Eudicot View MSA
122044402 5273 Angiosperm View MSA
121345695 5274 Embryophyte View MSA
123427497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain