Gene : Carub.0003s1272 C. rubella v1.1
Defline:  (1 of 3) PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1272
Name:  ? Carub.0003s1272 Secondary Identifier:  ? PAC:39241830
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1272 0.5kb upstream 0.5kb upstream 3861 true scaffold_3: 4404591-4408451 Capsella rubella
Carub.0003s1272 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4404591-4405090 Capsella rubella
Carub.0003s1272 0.5kb downstream 0.5kb downstream 3861 true scaffold_3: 4405091-4408951 Capsella rubella
Carub.0003s1272 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4408452-4408951 Capsella rubella
Carub.0003s1272 1.0kb upstream 1.0kb upstream 4361 true scaffold_3: 4404091-4408451 Capsella rubella
Carub.0003s1272 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4404091-4405090 Capsella rubella
Carub.0003s1272 1.0kb downstream 1.0kb downstream 4361 true scaffold_3: 4405091-4409451 Capsella rubella
Carub.0003s1272 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4408452-4409451 Capsella rubella
Carub.0003s1272 2.0kb upstream 2.0kb upstream 5361 true scaffold_3: 4403091-4408451 Capsella rubella
Carub.0003s1272 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4403091-4405090 Capsella rubella
Carub.0003s1272 2.0kb downstream 2.0kb downstream 5361 true scaffold_3: 4405091-4410451 Capsella rubella
Carub.0003s1272 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4408452-4410451 Capsella rubella
Carub.0003s1272 5.0kb upstream 5.0kb upstream 8361 true scaffold_3: 4400091-4408451 Capsella rubella
Carub.0003s1272 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4400091-4405090 Capsella rubella
Carub.0003s1272 5.0kb downstream 5.0kb downstream 8361 true scaffold_3: 4405091-4413451 Capsella rubella
Carub.0003s1272 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4408452-4413451 Capsella rubella
Carub.0003s1272 10.0kb upstream 10.0kb upstream 13361 true scaffold_3: 4395091-4408451 Capsella rubella
Carub.0003s1272 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4395091-4405090 Capsella rubella
Carub.0003s1272 10.0kb downstream 10.0kb downstream 13361 true scaffold_3: 4405091-4418451 Capsella rubella
Carub.0003s1272 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4408452-4418451 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041408 5273 Angiosperm View MSA
122373222 5261 Brassicaceae View MSA
123836250 5264 Brassicales-Malvales View MSA
124350109 5266 SBM View MSA
124245380 5268 Malvidae View MSA
124065588 5270 Rosid View MSA
123745758 5271 Pentapetalae View MSA
122795577 5272 Eudicot View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain