Gene : Carub.0003s0766 C. rubella v1.1
Defline:  (1 of 8) K05857 - phosphatidylinositol phospholipase C, delta (PLCD) Genomic Order:  766
Name:  ? Carub.0003s0766 Secondary Identifier:  ? PAC:39241589
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LIPASYN-PWY Capsella rubella pathologic  
Crubella PWY-6351 Capsella rubella pathologic  
Crubella PWY-6367 Capsella rubella pathologic  
Crubella PWY-7039 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0766 0.5kb upstream 0.5kb upstream 3994 true scaffold_3: 2631786-2635779 Capsella rubella
Carub.0003s0766 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2635280-2635779 Capsella rubella
Carub.0003s0766 0.5kb downstream 0.5kb downstream 3994 true scaffold_3: 2631286-2635279 Capsella rubella
Carub.0003s0766 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2631286-2631785 Capsella rubella
Carub.0003s0766 1.0kb upstream 1.0kb upstream 4494 true scaffold_3: 2631786-2636279 Capsella rubella
Carub.0003s0766 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2635280-2636279 Capsella rubella
Carub.0003s0766 1.0kb downstream 1.0kb downstream 4494 true scaffold_3: 2630786-2635279 Capsella rubella
Carub.0003s0766 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2630786-2631785 Capsella rubella
Carub.0003s0766 2.0kb upstream 2.0kb upstream 5494 true scaffold_3: 2631786-2637279 Capsella rubella
Carub.0003s0766 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2635280-2637279 Capsella rubella
Carub.0003s0766 2.0kb downstream 2.0kb downstream 5494 true scaffold_3: 2629786-2635279 Capsella rubella
Carub.0003s0766 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2629786-2631785 Capsella rubella
Carub.0003s0766 5.0kb upstream 5.0kb upstream 8494 true scaffold_3: 2631786-2640279 Capsella rubella
Carub.0003s0766 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2635280-2640279 Capsella rubella
Carub.0003s0766 5.0kb downstream 5.0kb downstream 8494 true scaffold_3: 2626786-2635279 Capsella rubella
Carub.0003s0766 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2626786-2631785 Capsella rubella
Carub.0003s0766 10.0kb upstream 10.0kb upstream 13494 true scaffold_3: 2631786-2645279 Capsella rubella
Carub.0003s0766 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2635280-2645279 Capsella rubella
Carub.0003s0766 10.0kb downstream 10.0kb downstream 13494 true scaffold_3: 2621786-2635279 Capsella rubella
Carub.0003s0766 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2621786-2631785 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376253 5261 Brassicaceae View MSA
123827505 5264 Brassicales-Malvales View MSA
124337245 5266 SBM View MSA
124244278 5268 Malvidae View MSA
124061623 5270 Rosid View MSA
123747750 5271 Pentapetalae View MSA
122786994 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain