Gene : Carub.0003s0774 C. rubella v1.1
Defline:  (1 of 1) K03945 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1 (NDUFA1) Genomic Order:  774
Name:  ? Carub.0003s0774 Secondary Identifier:  ? PAC:39239725
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-3781 Capsella rubella pathologic  
Crubella PWY-4302 Capsella rubella pathologic  
Crubella PWY-5083 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0774 0.5kb upstream 0.5kb upstream 1855 true scaffold_3: 2664287-2666141 Capsella rubella
Carub.0003s0774 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2665642-2666141 Capsella rubella
Carub.0003s0774 0.5kb downstream 0.5kb downstream 1855 true scaffold_3: 2663787-2665641 Capsella rubella
Carub.0003s0774 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2663787-2664286 Capsella rubella
Carub.0003s0774 1.0kb upstream 1.0kb upstream 2355 true scaffold_3: 2664287-2666641 Capsella rubella
Carub.0003s0774 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2665642-2666641 Capsella rubella
Carub.0003s0774 1.0kb downstream 1.0kb downstream 2355 true scaffold_3: 2663287-2665641 Capsella rubella
Carub.0003s0774 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2663287-2664286 Capsella rubella
Carub.0003s0774 2.0kb upstream 2.0kb upstream 3355 true scaffold_3: 2664287-2667641 Capsella rubella
Carub.0003s0774 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2665642-2667641 Capsella rubella
Carub.0003s0774 2.0kb downstream 2.0kb downstream 3355 true scaffold_3: 2662287-2665641 Capsella rubella
Carub.0003s0774 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2662287-2664286 Capsella rubella
Carub.0003s0774 5.0kb upstream 5.0kb upstream 6355 true scaffold_3: 2664287-2670641 Capsella rubella
Carub.0003s0774 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2665642-2670641 Capsella rubella
Carub.0003s0774 5.0kb downstream 5.0kb downstream 6355 true scaffold_3: 2659287-2665641 Capsella rubella
Carub.0003s0774 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2659287-2664286 Capsella rubella
Carub.0003s0774 10.0kb upstream 10.0kb upstream 11355 true scaffold_3: 2664287-2675641 Capsella rubella
Carub.0003s0774 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2665642-2675641 Capsella rubella
Carub.0003s0774 10.0kb downstream 10.0kb downstream 11355 true scaffold_3: 2654287-2665641 Capsella rubella
Carub.0003s0774 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2654287-2664286 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026299 5273 Angiosperm View MSA
122381460 5261 Brassicaceae View MSA
123832604 5264 Brassicales-Malvales View MSA
124321813 5266 SBM View MSA
124239940 5268 Malvidae View MSA
124063685 5270 Rosid View MSA
123737855 5271 Pentapetalae View MSA
122792879 5272 Eudicot View MSA
121345909 5274 Embryophyte View MSA
123427209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain